Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.94□□□□□ -1.46
CCNA1P78396 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.94□□□□□ -1.46
CCNA1P78396 GLUD1P3-202ENST00000508551 200 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 AC093815.1-201ENST00000508637 280 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 OR4A17P-201ENST00000526032 904 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CCNA1P78396 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.94□□□□□ -1.46
CCNA1P78396 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.94□□□□□ -1.46
CCNA1P78396 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.94□□□□□ -1.46
CCNA1P78396 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.94□□□□□ -1.46
CCNA1P78396 AL162431.4-201ENST00000604674 411 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 AL031658.2-201ENST00000616850 651 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 AP002512.4-202ENST00000641599 4530 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 AC232271.1-201ENST00000602455 2715 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CCNA1P78396 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 AC132825.1-201ENST00000463573 2247 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.93□□□□□ -1.46
CCNA1P78396 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCNA1P78396 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.93□□□□□ -1.46
CCNA1P78396 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCNA1P78396 SNORA66-201ENST00000384792 133 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 RNU6-233P-201ENST00000410845 141 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.93□□□□□ -1.46
CCNA1P78396 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.93□□□□□ -1.46
CCNA1P78396 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCNA1P78396 NMNAT1P1-201ENST00000554095 876 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.93□□□□□ -1.46
CCNA1P78396 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 AC008814.1-201ENST00000603797 406 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 AC099654.6-201ENST00000636487 512 ntBASIC5.93□□□□□ -1.46
CCNA1P78396 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.93□□□□□ -1.46
CCNA1P78396 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCNA1P78396 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.92□□□□□ -1.46
CCNA1P78396 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCNA1P78396 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCNA1P78396 U3.28-201ENST00000391249 210 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCNA1P78396 RNU2-50P-201ENST00000410494 143 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 AL133482.1-201ENST00000415988 498 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 AL034379.1-201ENST00000423216 253 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 AC112498.1-201ENST00000444401 332 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 AC083899.1-201ENST00000454465 3819 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 RPS24P16-201ENST00000497294 392 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 BTF3P13-201ENST00000513224 490 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.92□□□□□ -1.46
CCNA1P78396 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.92□□□□□ -1.46
CCNA1P78396 AC010547.7-201ENST00000570323 333 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.92□□□□□ -1.46
CCNA1P78396 MEMO1P5-201ENST00000604810 406 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 AL034549.2-201ENST00000618285 3373 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 OR9K1P-202ENST00000641111 3217 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CCNA1P78396 AC140134.1-201ENST00000511830 3544 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 AC100757.1-201ENST00000616872 1835 ntBASIC5.92□□□□□ -1.46
CCNA1P78396 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCNA1P78396 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.92□□□□□ -1.46
CCNA1P78396 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms