Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 OR11H3P-201ENST00000554547 982 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 AL353729.2-201ENST00000605859 1249 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN6P56747 AC135068.5-201ENST00000624197 983 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 AC073869.8-201ENST00000641806 335 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 MFSD8-216ENST00000641147 4009 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN6P56747 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN6P56747 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 HSPD1P7-201ENST00000447985 1686 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 RPL12P17-201ENST00000432393 498 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AC138761.5-201ENST00000433967 325 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AL138878.2-201ENST00000440581 1241 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN6P56747 AC112498.1-201ENST00000444401 332 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN6P56747 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN6P56747 AP000797.2-201ENST00000475768 606 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 RPL7P40-201ENST00000481703 745 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN6P56747 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN6P56747 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 GAPDHP62-201ENST00000515313 990 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 GCSHP4-201ENST00000538792 439 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN6P56747 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN6P56747 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 AC016839.1-201ENST00000578162 867 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN6P56747 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 MEMO1P5-201ENST00000604810 406 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 AL356317.1-201ENST00000396110 1436 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLDN6P56747 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 AL031595.2-201ENST00000624215 19071 ntBASIC5.02□□□□□ -1.61
CLDN6P56747 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN6P56747 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN6P56747 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLDN6P56747 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN6P56747 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN6P56747 OR4F13P-202ENST00000560066 2054 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 UGT2B24P-201ENST00000514441 1597 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLDN6P56747 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 RN7SKP185-201ENST00000362813 326 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 RNA5SP428-201ENST00000365129 132 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLDN6P56747 ADAM24P-201ENST00000398655 2101 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 AL078599.1-201ENST00000402075 293 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 AL356967.1-201ENST00000406305 431 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN6P56747 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
CLDN6P56747 AL133482.1-201ENST00000415988 498 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 HSPD1P12-201ENST00000429127 1069 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 PRPF38AP2-201ENST00000438179 851 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms