Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.88□□□□□ -1.79
CMC4P56277 AC106730.2-201ENST00000566641 540 ntBASIC3.88□□□□□ -1.79
CMC4P56277 ADAM3B-201ENST00000569937 840 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC027216.1-201ENST00000577726 685 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC016839.1-201ENST00000578162 867 ntBASIC3.88□□□□□ -1.79
CMC4P56277 MIR1269B-201ENST00000580405 75 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.88□□□□□ -1.79
CMC4P56277 AC125494.2-201ENST00000602431 657 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC011626.1-201ENST00000604710 562 ntBASIC3.88□□□□□ -1.79
CMC4P56277 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.88□□□□□ -1.79
CMC4P56277 MIR6886-201ENST00000619864 61 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AP002505.2-201ENST00000623585 696 ntBASIC3.88□□□□□ -1.79
CMC4P56277 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CMC4P56277 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CMC4P56277 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 TTC41P-205ENST00000551270 3963 ntBASIC3.87□□□□□ -1.79
CMC4P56277 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 HSPA8P18-201ENST00000439846 1928 ntBASIC3.87□□□□□ -1.79
CMC4P56277 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CMC4P56277 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 AC003973.3-201ENST00000624863 2822 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC097063.1-201ENST00000426714 1797 ntBASIC3.87□□□□□ -1.79
CMC4P56277 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.87□□□□□ -1.79
CMC4P56277 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 MIR133A2-201ENST00000347538 102 ntBASIC3.87□□□□□ -1.79
CMC4P56277 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 U3.36-201ENST00000408418 213 ntBASIC3.87□□□□□ -1.79
CMC4P56277 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 AC098592.2-201ENST00000413158 265 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC096644.3-201ENST00000416788 338 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 AL139148.1-201ENST00000427122 680 ntBASIC3.87□□□□□ -1.79
CMC4P56277 BX119904.3-201ENST00000428194 957 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 CNOT7P2-201ENST00000441051 832 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 AC093827.1-201ENST00000480094 861 ntBASIC3.87□□□□□ -1.79
CMC4P56277 RN7SL214P-201ENST00000487317 265 ntBASIC3.87□□□□□ -1.79
CMC4P56277 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 RPL15P21-201ENST00000495592 567 ntBASIC3.87□□□□□ -1.79
CMC4P56277 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC072052.1-201ENST00000496556 306 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC006499.3-201ENST00000506077 748 ntBASIC3.87□□□□□ -1.79
CMC4P56277 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.87□□□□□ -1.79
CMC4P56277 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 AP001284.1-201ENST00000528393 2118 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC134349.2-201ENST00000535136 910 ntBASIC3.87□□□□□ -1.79
CMC4P56277 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 NMNAT1P1-201ENST00000554095 876 ntBASIC3.87□□□□□ -1.79
CMC4P56277 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 NDUFB4P11-201ENST00000560510 395 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.87□□□□□ -1.79
CMC4P56277 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 SNORA35B-201ENST00000607417 129 ntBASIC3.87□□□□□ -1.79
CMC4P56277 EIF3FP1-201ENST00000613970 806 ntBASIC3.87□□□□□ -1.79
CMC4P56277 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.87□□□□□ -1.79
CMC4P56277 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CMC4P56277 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
CMC4P56277 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC3.87□□□□□ -1.79
CMC4P56277 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.87□□□□□ -1.79
CMC4P56277 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.87□□□□□ -1.79
CMC4P56277 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 CASC19-260ENST00000641828 2001 ntBASIC3.87□□□□□ -1.79
CMC4P56277 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CMC4P56277 MAPK10-286ENST00000641208 8747 ntBASIC3.87□□□□□ -1.79
CMC4P56277 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
CMC4P56277 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CMC4P56277 AC114947.2-201ENST00000565748 2125 ntBASIC3.86□□□□□ -1.79
CMC4P56277 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 PANDAR-201ENST00000629595 1506 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms