Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 RNU6-792P-201ENST00000363490 107 ntBASIC5.95□□□□□ -1.46
COPB1P53618 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 SNORA48.4-201ENST00000391089 134 ntBASIC5.95□□□□□ -1.46
COPB1P53618 SNORA17A-201ENST00000391185 133 ntBASIC5.95□□□□□ -1.46
COPB1P53618 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 DBIP1-201ENST00000401435 260 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AC092570.3-201ENST00000420113 693 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.95□□□□□ -1.46
COPB1P53618 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC104843.2-201ENST00000427666 297 ntBASIC5.95□□□□□ -1.46
COPB1P53618 MTND2P2-201ENST00000434633 945 ntBASIC5.95□□□□□ -1.46
COPB1P53618 Z99127.2-201ENST00000441426 334 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AC005297.1-201ENST00000444765 862 ntBASIC5.95□□□□□ -1.46
COPB1P53618 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.95□□□□□ -1.46
COPB1P53618 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 AL035090.1-201ENST00000454835 332 ntBASIC5.95□□□□□ -1.46
COPB1P53618 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC090543.1-201ENST00000492168 485 ntBASIC5.95□□□□□ -1.46
COPB1P53618 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 MTATP6P1-201ENST00000514057 681 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 KCTD9P6-201ENST00000522306 950 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.95□□□□□ -1.46
COPB1P53618 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.95□□□□□ -1.46
COPB1P53618 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.95□□□□□ -1.46
COPB1P53618 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 MRPS21P7-201ENST00000566937 238 ntBASIC5.95□□□□□ -1.46
COPB1P53618 RN7SL339P-201ENST00000580597 296 ntBASIC5.95□□□□□ -1.46
COPB1P53618 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC025016.1-201ENST00000616746 682 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 AC091932.2-201ENST00000623014 291 ntBASIC5.95□□□□□ -1.46
COPB1P53618 SNORA17.5-201ENST00000630429 132 ntBASIC5.95□□□□□ -1.46
COPB1P53618 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.95□□□□□ -1.46
COPB1P53618 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.95□□□□□ -1.46
COPB1P53618 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 AL034549.2-201ENST00000618285 3373 ntBASIC5.94□□□□□ -1.46
COPB1P53618 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COPB1P53618 AC114786.1-201ENST00000512892 1415 ntBASIC5.94□□□□□ -1.46
COPB1P53618 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 RN7SKP6-201ENST00000364795 319 ntBASIC5.94□□□□□ -1.46
COPB1P53618 RNU6-650P-201ENST00000365658 111 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 RNA5SP178-201ENST00000410380 128 ntBASIC5.94□□□□□ -1.46
COPB1P53618 SLC20A1P1-201ENST00000413906 956 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 DPPA2P2-201ENST00000418220 897 ntBASIC5.94□□□□□ -1.46
COPB1P53618 ARAFP1-201ENST00000422172 605 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 CDY8P-201ENST00000428380 1279 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 AL513321.1-201ENST00000441175 761 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 CDY20P-201ENST00000447528 1279 ntBASIC5.94□□□□□ -1.46
COPB1P53618 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AL450023.1-201ENST00000450868 751 ntBASIC5.94□□□□□ -1.46
COPB1P53618 PRPF38AP1-201ENST00000451976 933 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC093663.2-201ENST00000484625 313 ntBASIC5.94□□□□□ -1.46
COPB1P53618 RPS12P31-201ENST00000491419 398 ntBASIC5.94□□□□□ -1.46
COPB1P53618 RPL15P21-201ENST00000495592 567 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC026782.2-201ENST00000510845 636 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AC006499.4-201ENST00000510947 694 ntBASIC5.94□□□□□ -1.46
COPB1P53618 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 SNORA43.3-201ENST00000517240 103 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AC103833.1-201ENST00000517442 172 ntBASIC5.94□□□□□ -1.46
COPB1P53618 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 AC138832.1-201ENST00000522871 556 ntBASIC5.94□□□□□ -1.46
COPB1P53618 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms