Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SRP9P49458 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 SCARNA15-201ENST00000607520 4325 ntBASIC4.6□□□□□ -1.67
SRP9P49458 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 RN7SKP160-201ENST00000363804 340 ntBASIC4.6□□□□□ -1.67
SRP9P49458 RNA5SP234-201ENST00000363916 119 ntBASIC4.6□□□□□ -1.67
SRP9P49458 U3.25-201ENST00000391209 220 ntBASIC4.6□□□□□ -1.67
SRP9P49458 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 AL133325.1-201ENST00000421090 382 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 AC046176.1-201ENST00000435260 1170 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 GAPDHP25-201ENST00000447061 1001 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 RPL7P40-201ENST00000481703 745 ntBASIC4.6□□□□□ -1.67
SRP9P49458 RN7SL184P-201ENST00000488308 297 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.6□□□□□ -1.67
SRP9P49458 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 BNIP3P1-201ENST00000547295 580 ntBASIC4.6□□□□□ -1.67
SRP9P49458 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 BLZF2P-201ENST00000553776 1130 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AC007225.2-201ENST00000562529 256 ntBASIC4.6□□□□□ -1.67
SRP9P49458 RN7SL435P-201ENST00000584418 282 ntBASIC4.6□□□□□ -1.67
SRP9P49458 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 AP000648.2-201ENST00000624182 404 ntBASIC4.6□□□□□ -1.67
SRP9P49458 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRP9P49458 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.6□□□□□ -1.67
SRP9P49458 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.6□□□□□ -1.67
SRP9P49458 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SRP9P49458 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.59□□□□□ -1.67
SRP9P49458 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 RN7SKP59-201ENST00000410520 314 ntBASIC4.59□□□□□ -1.67
SRP9P49458 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 MARK2P12-201ENST00000420129 585 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 DSTNP5-201ENST00000427921 523 ntBASIC4.59□□□□□ -1.67
SRP9P49458 CYCSP6-201ENST00000434498 302 ntBASIC4.59□□□□□ -1.67
SRP9P49458 CYCSP12-201ENST00000437729 300 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 AL136455.1-201ENST00000441083 1240 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.59□□□□□ -1.67
SRP9P49458 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.59□□□□□ -1.67
SRP9P49458 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.59□□□□□ -1.67
SRP9P49458 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 AC008410.1-201ENST00000483777 339 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AC022133.1-201ENST00000490961 571 ntBASIC4.59□□□□□ -1.67
SRP9P49458 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
SRP9P49458 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 AC022882.1-201ENST00000532142 501 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.59□□□□□ -1.67
SRP9P49458 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.59□□□□□ -1.67
SRP9P49458 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.59□□□□□ -1.67
SRP9P49458 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRP9P49458 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 RN7SL356P-201ENST00000582228 248 ntBASIC4.59□□□□□ -1.67
SRP9P49458 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 AC009027.1-201ENST00000604510 479 ntBASIC4.59□□□□□ -1.67
SRP9P49458 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.59□□□□□ -1.67
SRP9P49458 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SRP9P49458 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SRP9P49458 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SRP9P49458 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRP9P49458 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SRP9P49458 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SRP9P49458 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms