Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC108738.1-201ENST00000603703 237 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 AC011626.1-201ENST00000604710 562 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AC093909.5-201ENST00000621839 1799 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TM4SF1P30408 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TM4SF1P30408 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC079298.1-201ENST00000625026 1619 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TM4SF1P30408 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 NPM1P10-201ENST00000398310 865 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.37□□□□□ -1.39
TM4SF1P30408 RSL24D1P6-201ENST00000426934 401 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 AC093414.1-201ENST00000434712 514 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC020779.1-201ENST00000478757 796 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC010350.1-201ENST00000504908 231 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 RN7SKP92-201ENST00000517266 244 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.37□□□□□ -1.39
TM4SF1P30408 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC020910.3-201ENST00000603701 874 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC068831.8-201ENST00000620171 435 ntBASIC6.37□□□□□ -1.39
TM4SF1P30408 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TM4SF1P30408 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.37□□□□□ -1.39
TM4SF1P30408 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.37□□□□□ -1.39
TM4SF1P30408 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 AP000641.1-201ENST00000531988 1639 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 NAMPTP1-201ENST00000440465 2514 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TM4SF1P30408 FAM3C2-201ENST00000312214 681 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC017019.1-201ENST00000426129 261 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 TCEA1P1-201ENST00000449716 880 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 RPL7P41-201ENST00000485823 957 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 RPS26P24-201ENST00000497656 331 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 IGBP1P4-201ENST00000503202 879 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC111000.3-201ENST00000508057 576 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 SNORA70.17-201ENST00000516449 133 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 AL590392.1-201ENST00000604960 446 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.36□□□□□ -1.39
TM4SF1P30408 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.36□□□□□ -1.39
TM4SF1P30408 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM4SF1P30408 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.36□□□□□ -1.39
TM4SF1P30408 AL137141.1-201ENST00000624622 4836 ntBASIC6.36□□□□□ -1.39
TM4SF1P30408 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
TM4SF1P30408 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM4SF1P30408 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TM4SF1P30408 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM4SF1P30408 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms