Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 OR8K4P-201ENST00000534608 872 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 EDDM3DP-201ENST00000554692 434 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 AC005951.1-201ENST00000576706 485 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 MIR1254-2-201ENST00000579553 63 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 AL359757.1-201ENST00000623176 255 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.22□□□□□ -1.41
POLR2AP24928 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
POLR2AP24928 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
POLR2AP24928 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
POLR2AP24928 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
POLR2AP24928 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.22□□□□□ -1.41
POLR2AP24928 AL008638.3-201ENST00000623027 5182 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.22□□□□□ -1.41
POLR2AP24928 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.22□□□□□ -1.41
POLR2AP24928 DHX40P1-201ENST00000588725 1412 ntBASIC6.22□□□□□ -1.41
POLR2AP24928 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.21□□□□□ -1.41
POLR2AP24928 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
POLR2AP24928 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
POLR2AP24928 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.21□□□□□ -1.41
POLR2AP24928 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.21□□□□□ -1.41
POLR2AP24928 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
POLR2AP24928 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
POLR2AP24928 RAD17P2-201ENST00000451754 1977 ntBASIC6.21□□□□□ -1.41
POLR2AP24928 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
POLR2AP24928 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
POLR2AP24928 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
POLR2AP24928 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 RIMKLBP2-201ENST00000424737 654 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 RPS4XP16-201ENST00000427198 791 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 RPL5P25-201ENST00000441148 775 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 AL513533.1-201ENST00000453728 415 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 EIF2S2P4-201ENST00000461070 984 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 AC025768.1-201ENST00000510057 267 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 RN7SKP265-201ENST00000516448 223 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 AC008147.3-201ENST00000548666 354 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.21□□□□□ -1.42
POLR2AP24928 MEMO1P5-201ENST00000604810 406 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 KATNBL1P5-201ENST00000605015 517 ntBASIC6.21□□□□□ -1.42
POLR2AP24928 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
POLR2AP24928 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
POLR2AP24928 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.21□□□□□ -1.42
POLR2AP24928 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
POLR2AP24928 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 HSFY4P-201ENST00000415994 1181 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 RNGTTP1-201ENST00000420965 728 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 MTCO2P23-201ENST00000425216 680 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC117522.2-201ENST00000510049 657 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 AL049874.4-201ENST00000557593 255 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 ELOCP35-201ENST00000604289 336 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.2□□□□□ -1.42
POLR2AP24928 AP000676.4-201ENST00000624659 623 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.2□□□□□ -1.42
POLR2AP24928 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 RNA5SP113-201ENST00000410486 84 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC107081.1-201ENST00000414975 361 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AL357078.2-201ENST00000416486 427 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 MTCYBP31-201ENST00000438855 1122 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
POLR2AP24928 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC093827.1-201ENST00000480094 861 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC013356.1-201ENST00000489027 564 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
POLR2AP24928 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms