Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USF1P22415 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.54□□□□□ -1.68
USF1P22415 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USF1P22415 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USF1P22415 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USF1P22415 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USF1P22415 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.54□□□□□ -1.68
USF1P22415 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USF1P22415 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USF1P22415 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.54□□□□□ -1.68
USF1P22415 AC114947.2-201ENST00000565748 2125 ntBASIC4.54□□□□□ -1.68
USF1P22415 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.54□□□□□ -1.68
USF1P22415 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.54□□□□□ -1.68
USF1P22415 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 SOCS5P3-201ENST00000425115 1576 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.53□□□□□ -1.68
USF1P22415 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USF1P22415 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USF1P22415 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 U3.2-201ENST00000362981 210 ntBASIC4.53□□□□□ -1.68
USF1P22415 RN7SKP115-201ENST00000363177 317 ntBASIC4.53□□□□□ -1.68
USF1P22415 SNORA70.6-201ENST00000383934 134 ntBASIC4.53□□□□□ -1.68
USF1P22415 RNU1-106P-201ENST00000384382 164 ntBASIC4.53□□□□□ -1.68
USF1P22415 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USF1P22415 U3.28-201ENST00000391249 210 ntBASIC4.53□□□□□ -1.68
USF1P22415 U3.36-201ENST00000408418 213 ntBASIC4.53□□□□□ -1.68
USF1P22415 RN7SKP216-201ENST00000411050 312 ntBASIC4.53□□□□□ -1.68
USF1P22415 RNU2-22P-201ENST00000411266 212 ntBASIC4.53□□□□□ -1.68
USF1P22415 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
USF1P22415 OR6C64P-201ENST00000419708 825 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC007161.1-204ENST00000423039 460 ntBASIC4.53□□□□□ -1.68
USF1P22415 RIMKLBP2-201ENST00000424737 654 ntBASIC4.53□□□□□ -1.68
USF1P22415 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC006466.1-201ENST00000438721 289 ntBASIC4.53□□□□□ -1.68
USF1P22415 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.53□□□□□ -1.68
USF1P22415 IGBP1P3-201ENST00000447449 1000 ntBASIC4.53□□□□□ -1.68
USF1P22415 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.53□□□□□ -1.68
USF1P22415 OR11I1P-201ENST00000486033 954 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.53□□□□□ -1.68
USF1P22415 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.53□□□□□ -1.68
USF1P22415 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.53□□□□□ -1.68
USF1P22415 AL359219.2-201ENST00000555184 348 ntBASIC4.53□□□□□ -1.68
USF1P22415 SETP1-201ENST00000556014 845 ntBASIC4.53□□□□□ -1.68
USF1P22415 RPL10P14-201ENST00000565265 298 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.53□□□□□ -1.68
USF1P22415 AC133644.2-201ENST00000608142 540 ntBASIC4.53□□□□□ -1.68
USF1P22415 MIR6748-201ENST00000610433 71 ntBASIC4.53□□□□□ -1.68
USF1P22415 MIR6133-201ENST00000617057 108 ntBASIC4.53□□□□□ -1.68
USF1P22415 AP001784.1-201ENST00000624107 428 ntBASIC4.53□□□□□ -1.68
USF1P22415 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.53□□□□□ -1.68
USF1P22415 CYP4F35P-202ENST00000636121 390 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC003985.2-201ENST00000562268 1669 ntBASIC4.53□□□□□ -1.68
USF1P22415 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.53□□□□□ -1.68
USF1P22415 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF1P22415 AC008079.2-201ENST00000623543 20396 ntBASIC4.53□□□□□ -1.68
USF1P22415 AC023421.1-201ENST00000590535 1785 ntBASIC4.53□□□□□ -1.69
USF1P22415 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
USF1P22415 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.52□□□□□ -1.69
USF1P22415 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 OR55B1P-203ENST00000641518 2602 ntBASIC4.52□□□□□ -1.69
USF1P22415 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
USF1P22415 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.52□□□□□ -1.69
USF1P22415 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 SNORA17.1-201ENST00000362945 126 ntBASIC4.52□□□□□ -1.69
USF1P22415 RNA5SP326-201ENST00000363209 110 ntBASIC4.52□□□□□ -1.69
USF1P22415 RN7SKP145-201ENST00000363291 303 ntBASIC4.52□□□□□ -1.69
USF1P22415 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.52□□□□□ -1.69
USF1P22415 AL358178.1-201ENST00000407698 397 ntBASIC4.52□□□□□ -1.69
USF1P22415 RBMY2KP-201ENST00000418221 992 ntBASIC4.52□□□□□ -1.69
USF1P22415 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.52□□□□□ -1.69
USF1P22415 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.52□□□□□ -1.69
USF1P22415 AL359265.1-201ENST00000440296 795 ntBASIC4.52□□□□□ -1.69
USF1P22415 AC239798.3-201ENST00000454459 408 ntBASIC4.52□□□□□ -1.69
USF1P22415 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 RPL35AP28-201ENST00000459730 331 ntBASIC4.52□□□□□ -1.69
USF1P22415 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USF1P22415 RPSAP51-201ENST00000497462 645 ntBASIC4.52□□□□□ -1.69
USF1P22415 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.52□□□□□ -1.69
USF1P22415 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms