Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC235565.1-201ENST00000456962 1325 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFRAP16234 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 OR9G4-201ENST00000302957 984 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 OR1L6-202ENST00000373684 1044 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 MIR7-1-201ENST00000384871 110 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 MIR1286-201ENST00000408112 78 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 RPS11P7-201ENST00000442125 465 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC104634.1-201ENST00000452720 462 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 RPL7P39-201ENST00000481157 744 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 RPL7P40-201ENST00000481703 745 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 OR9N1P-201ENST00000491296 333 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFRAP16234 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC067805.1-201ENST00000559344 470 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC008115.4-201ENST00000619780 775 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC004808.2-201ENST00000627965 773 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC074101.1-201ENST00000637861 241 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFRAP16234 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDGFRAP16234 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDGFRAP16234 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC027228.2-201ENST00000567141 2154 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
PDGFRAP16234 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 AL606537.1-201ENST00000607258 2011 ntBASIC5.57□□□□□ -1.52
PDGFRAP16234 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDGFRAP16234 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 OR9K1P-201ENST00000326513 941 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 RN7SKP153-201ENST00000365026 316 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 RNA5SP339-201ENST00000390987 122 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 SNORA48.4-201ENST00000391089 134 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AC106901.1-201ENST00000425086 698 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 NDUFA5P1-201ENST00000433858 341 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC090018.1-201ENST00000434369 367 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AC079168.1-201ENST00000458741 345 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 CBX1P5-201ENST00000475330 559 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 OR11I1P-201ENST00000486033 954 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC024558.1-201ENST00000505008 528 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 PGAM1P13-201ENST00000507497 754 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 RNA5SP34-201ENST00000516887 130 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 RNA5SP373-201ENST00000517271 95 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC104997.1-201ENST00000519761 717 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AL049779.2-201ENST00000553847 315 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 RPL10P14-201ENST00000565265 298 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC106730.2-201ENST00000566641 540 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AL162431.4-201ENST00000604674 411 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC012213.4-201ENST00000606457 354 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 OR51C1P-201ENST00000608504 942 ntBASIC5.56□□□□□ -1.52
PDGFRAP16234 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFRAP16234 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms