Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC105233.1-201ENST00000498840 781 ntBASIC5.85□□□□□ -1.47
MMP3P08254 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 OR4A43P-201ENST00000532938 908 ntBASIC5.85□□□□□ -1.47
MMP3P08254 CR383656.6-201ENST00000550518 394 ntBASIC5.85□□□□□ -1.47
MMP3P08254 HMGN2P47-201ENST00000559378 272 ntBASIC5.85□□□□□ -1.47
MMP3P08254 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP3P08254 AL391001.1-201ENST00000602747 715 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AL627230.1-201ENST00000613077 211 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AL591926.8-201ENST00000616876 211 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AC087385.3-201ENST00000620477 187 ntBASIC5.85□□□□□ -1.47
MMP3P08254 uc_338.7-201ENST00000621834 124 ntBASIC5.85□□□□□ -1.47
MMP3P08254 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP3P08254 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MMP3P08254 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
MMP3P08254 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 AC018628.1-201ENST00000624147 3819 ntBASIC5.84□□□□□ -1.47
MMP3P08254 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MMP3P08254 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 AC003973.3-201ENST00000624863 2822 ntBASIC5.84□□□□□ -1.47
MMP3P08254 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 RNA5SP90-201ENST00000364801 99 ntBASIC5.84□□□□□ -1.47
MMP3P08254 RNA5SP455-201ENST00000365190 119 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AL451142.1-201ENST00000375867 775 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.84□□□□□ -1.47
MMP3P08254 AL512504.1-201ENST00000415494 778 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC017078.1-201ENST00000416146 368 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AL360081.1-201ENST00000428299 555 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP3P08254 RHOT1P3-201ENST00000436571 331 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 RPL31P44-201ENST00000447680 377 ntBASIC5.84□□□□□ -1.47
MMP3P08254 MTND3P24-201ENST00000506306 329 ntBASIC5.84□□□□□ -1.47
MMP3P08254 RN7SKP67-201ENST00000515905 235 ntBASIC5.84□□□□□ -1.47
MMP3P08254 RNU6-760P-201ENST00000516078 97 ntBASIC5.84□□□□□ -1.47
MMP3P08254 KCTD9P6-201ENST00000522306 950 ntBASIC5.84□□□□□ -1.47
MMP3P08254 OR4A17P-201ENST00000526032 904 ntBASIC5.84□□□□□ -1.47
MMP3P08254 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP3P08254 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
MMP3P08254 MIR4691-201ENST00000583764 85 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC008814.1-201ENST00000603797 406 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC005084.1-201ENST00000605160 304 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AC135803.1-201ENST00000608748 565 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AL139124.1-201ENST00000609123 421 ntBASIC5.84□□□□□ -1.47
MMP3P08254 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 AC112694.2-201ENST00000623697 768 ntBASIC5.84□□□□□ -1.47
MMP3P08254 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 AC099654.6-201ENST00000636487 512 ntBASIC5.84□□□□□ -1.47
MMP3P08254 AP000550.3-201ENST00000637734 379 ntBASIC5.84□□□□□ -1.47
MMP3P08254 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MMP3P08254 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP3P08254 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP3P08254 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
MMP3P08254 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.84□□□□□ -1.48
MMP3P08254 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
MMP3P08254 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.84□□□□□ -1.48
MMP3P08254 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.84□□□□□ -1.48
MMP3P08254 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.84□□□□□ -1.48
MMP3P08254 AP001002.1-201ENST00000625148 1513 ntBASIC5.84□□□□□ -1.48
MMP3P08254 NXF4-202ENST00000416098 1465 ntBASIC5.83□□□□□ -1.48
MMP3P08254 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
MMP3P08254 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 AL512283.1-201ENST00000606756 1384 ntBASIC5.83□□□□□ -1.48
MMP3P08254 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
MMP3P08254 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 AP000432.2-201ENST00000624164 2048 ntBASIC5.83□□□□□ -1.48
MMP3P08254 MTHFD2P5-201ENST00000320415 844 ntBASIC5.83□□□□□ -1.48
MMP3P08254 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms