Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AGGF1P9-201ENST00000561884 913 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 MEMO1P5-201ENST00000604810 406 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC005377.1-201ENST00000605126 456 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 SAMMSON-227ENST00000642114 1199 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC100778.3-201ENST00000580060 1750 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC068446.1-201ENST00000556425 1549 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 PEX12P1-201ENST00000400284 1048 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 RNU4-34P-201ENST00000410431 124 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC007738.1-201ENST00000413892 348 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 GJA6P-201ENST00000415117 1042 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 TCEA1P3-201ENST00000443005 880 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 RPSAP50-201ENST00000481955 852 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 RN7SKP147-201ENST00000517154 244 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC013701.1-201ENST00000522657 465 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC011840.5-201ENST00000582125 771 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC016769.4-201ENST00000616893 535 ntBASIC5.07□□□□□ -1.6
HLA-DQB2P05538 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQB2P05538 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC005005.4-201ENST00000623789 16698 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC139426.3-201ENST00000605648 2059 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 SNORA73.1-201ENST00000363107 205 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RNA5SP507-201ENST00000363603 121 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RNU4-4P-201ENST00000364588 130 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 QRSL1P2-201ENST00000418582 964 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RPL35AP21-201ENST00000437667 333 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 SCAND3P1-201ENST00000439854 1060 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC073052.1-201ENST00000440417 714 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC073850.1-201ENST00000449243 255 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AL356981.1-201ENST00000454879 684 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC093166.2-201ENST00000455969 1017 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RN7SL244P-201ENST00000493405 297 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RPL37AP8-201ENST00000494116 276 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RN7SL808P-201ENST00000496066 299 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AL445222.1-201ENST00000607259 628 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 SDR42E1P1-201ENST00000611327 477 ntBASIC5.06□□□□□ -1.6
HLA-DQB2P05538 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQB2P05538 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 ECM1P2-201ENST00000503354 1577 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AL136116.2-201ENST00000404020 785 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 RN7SKP213-201ENST00000410746 298 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AF186996.5-201ENST00000418098 904 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC093162.1-201ENST00000419682 124 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms