Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGN1P05114 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGN1P05114 AC008814.1-201ENST00000603797 406 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGN1P05114 OR7M1P-201ENST00000608946 533 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 AC108359.1-201ENST00000616451 1211 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGN1P05114 CU639417.4-201ENST00000623928 207 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 AC074101.1-201ENST00000637861 241 ntBASIC4.71□□□□□ -1.66
HMGN1P05114 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGN1P05114 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGN1P05114 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGN1P05114 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGN1P05114 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HMGN1P05114 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGN1P05114 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HMGN1P05114 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMGN1P05114 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AL596448.1-201ENST00000415024 392 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 COX6CP13-201ENST00000428703 226 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGN1P05114 RN7SL51P-201ENST00000468230 285 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 AL117692.1-201ENST00000494283 713 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGN1P05114 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC015720.2-201ENST00000567709 334 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGN1P05114 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 MIR7109-201ENST00000613748 65 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 AC037198.3-201ENST00000616754 526 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 AC073593.1-201ENST00000624500 411 ntBASIC4.7□□□□□ -1.66
HMGN1P05114 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGN1P05114 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGN1P05114 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 SCN1A-220ENST00000641603 12506 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC107027.3-201ENST00000565095 3473 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGN1P05114 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGN1P05114 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGN1P05114 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGN1P05114 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGN1P05114 RNA5SP319-201ENST00000362768 119 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGN1P05114 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGN1P05114 MIR105-1-201ENST00000385222 81 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AL050305.1-201ENST00000399993 1230 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AL121834.1-202ENST00000404494 277 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 OR6E1P-201ENST00000414424 923 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGN1P05114 OR5M12P-201ENST00000423388 929 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 GTF2IP2-201ENST00000424290 697 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 IPMKP1-201ENST00000425988 855 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGN1P05114 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGN1P05114 KCTD9P1-201ENST00000430462 1167 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGN1P05114 AC004980.3-201ENST00000447046 365 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 AC108161.1-201ENST00000461060 402 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC091180.1-201ENST00000462104 372 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 RPL5P30-201ENST00000465511 891 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 HMGB3P16-201ENST00000508037 287 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC138866.2-201ENST00000508650 584 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGN1P05114 HMGB1P40-201ENST00000525121 540 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AL138895.2-201ENST00000603019 178 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 AL022393.1-201ENST00000625142 1677 ntBASIC4.69□□□□□ -1.66
HMGN1P05114 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGN1P05114 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HMGN1P05114 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms