Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC021193.1-201ENST00000511607 420 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.32□□□□□ -1.56
LDLRP01130 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 AC079064.1-201ENST00000528365 362 ntBASIC5.32□□□□□ -1.56
LDLRP01130 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 HMGN2P36-201ENST00000529541 409 ntBASIC5.32□□□□□ -1.56
LDLRP01130 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
LDLRP01130 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.32□□□□□ -1.56
LDLRP01130 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDLRP01130 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.32□□□□□ -1.56
LDLRP01130 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 ADAD1P2-201ENST00000588476 646 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.32□□□□□ -1.56
LDLRP01130 AC040174.2-201ENST00000602701 465 ntBASIC5.32□□□□□ -1.56
LDLRP01130 OR4H6P-202ENST00000603819 340 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AL021918.2-201ENST00000613415 194 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC087565.3-203ENST00000641018 837 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 AC006206.1-201ENST00000544842 3387 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC006484.1-201ENST00000435086 1884 ntBASIC5.32□□□□□ -1.56
LDLRP01130 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 MTCO1P15-201ENST00000529569 1526 ntBASIC5.32□□□□□ -1.56
LDLRP01130 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.32□□□□□ -1.56
LDLRP01130 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LDLRP01130 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.31□□□□□ -1.56
LDLRP01130 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 AC103591.2-201ENST00000265259 766 ntBASIC5.31□□□□□ -1.56
LDLRP01130 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LDLRP01130 MIR421-201ENST00000365696 85 ntBASIC5.31□□□□□ -1.56
LDLRP01130 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 RN7SKP125-201ENST00000410481 302 ntBASIC5.31□□□□□ -1.56
LDLRP01130 SEPT7P8-201ENST00000413308 775 ntBASIC5.31□□□□□ -1.56
LDLRP01130 TNPO1P1-201ENST00000423641 1138 ntBASIC5.31□□□□□ -1.56
LDLRP01130 MTND4LP14-201ENST00000429447 288 ntBASIC5.31□□□□□ -1.56
LDLRP01130 MTCO1P45-201ENST00000431457 267 ntBASIC5.31□□□□□ -1.56
LDLRP01130 ELOCP3-201ENST00000439303 348 ntBASIC5.31□□□□□ -1.56
LDLRP01130 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.31□□□□□ -1.56
LDLRP01130 AC091685.2-201ENST00000454924 864 ntBASIC5.31□□□□□ -1.56
LDLRP01130 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.31□□□□□ -1.56
LDLRP01130 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.31□□□□□ -1.56
LDLRP01130 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LDLRP01130 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.31□□□□□ -1.56
LDLRP01130 RNU6-467P-201ENST00000517027 110 ntBASIC5.31□□□□□ -1.56
LDLRP01130 SNORA43.3-201ENST00000517240 103 ntBASIC5.31□□□□□ -1.56
LDLRP01130 MTND1P36-201ENST00000522384 936 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.31□□□□□ -1.56
LDLRP01130 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.31□□□□□ -1.56
LDLRP01130 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.31□□□□□ -1.56
LDLRP01130 HAUS8P1-201ENST00000549005 542 ntBASIC5.31□□□□□ -1.56
LDLRP01130 IGBP1P1-201ENST00000554337 1009 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AL049872.1-201ENST00000556323 322 ntBASIC5.31□□□□□ -1.56
LDLRP01130 LINC00557-201ENST00000563184 1279 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AC009712.1-201ENST00000564938 316 ntBASIC5.31□□□□□ -1.56
LDLRP01130 FKBP1AP1-201ENST00000594588 318 ntBASIC5.31□□□□□ -1.56
LDLRP01130 HMGB1P51-201ENST00000605166 638 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AC008115.4-201ENST00000619780 775 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.31□□□□□ -1.56
LDLRP01130 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.31□□□□□ -1.56
LDLRP01130 AC006453.5-201ENST00000636451 619 ntBASIC5.31□□□□□ -1.56
LDLRP01130 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.31□□□□□ -1.56
LDLRP01130 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LDLRP01130 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDLRP01130 DDX6P1-205ENST00000441966 1436 ntBASIC5.31□□□□□ -1.56
LDLRP01130 OR10AB1P-202ENST00000641219 1686 ntBASIC5.31□□□□□ -1.56
LDLRP01130 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDLRP01130 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
LDLRP01130 RNU4-39P-201ENST00000362455 127 ntBASIC5.3□□□□□ -1.56
LDLRP01130 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDLRP01130 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
LDLRP01130 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 AC113412.1-201ENST00000425840 504 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms