Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5□□□□□ -1.61
CLDN9O95484 MIR4302-201ENST00000638058 60 ntBASIC5□□□□□ -1.61
CLDN9O95484 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLDN9O95484 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN9O95484 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN9O95484 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CLDN9O95484 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
CLDN9O95484 CASC19-221ENST00000641309 1382 ntBASIC5□□□□□ -1.61
CLDN9O95484 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN9O95484 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5□□□□□ -1.61
CLDN9O95484 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN9O95484 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5□□□□□ -1.61
CLDN9O95484 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CLDN9O95484 MIR323A-201ENST00000362199 86 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 RNU6-1331P-201ENST00000363658 106 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 RNA5SP132-201ENST00000364725 118 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 MIR143-201ENST00000385300 106 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC007738.1-201ENST00000413892 348 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN9O95484 RPS4XP16-201ENST00000427198 791 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 COX6CP13-201ENST00000428703 226 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 RPL7L1P9-201ENST00000431298 745 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN9O95484 RAB9AP5-201ENST00000437794 597 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 ARAFP2-201ENST00000440565 559 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 RAB9AP2-201ENST00000443911 597 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN9O95484 Z92846.1-201ENST00000456203 268 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 AC020779.1-201ENST00000478757 796 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC098583.1-201ENST00000480875 255 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN9O95484 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 AGGF1P3-201ENST00000493675 1213 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC015864.1-201ENST00000496512 544 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 MORF4L2P1-201ENST00000503761 858 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 RNA5SP362-201ENST00000516048 118 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.99□□□□□ -1.61
CLDN9O95484 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN9O95484 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN9O95484 AL451049.1-201ENST00000608672 497 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC079395.2-201ENST00000610982 737 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AL512624.1-201ENST00000613638 469 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
CLDN9O95484 AC136428.4-201ENST00000634254 1155 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CLDN9O95484 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 AC019072.1-201ENST00000604535 1551 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLDN9O95484 AC063976.2-201ENST00000425667 3556 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 AC245100.2-201ENST00000454544 1679 ntBASIC4.99□□□□□ -1.61
CLDN9O95484 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 AC112255.1-201ENST00000624070 2493 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 EI24P3-201ENST00000399046 1062 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 NUDT19P3-201ENST00000404698 555 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN9O95484 SPRYD7P1-201ENST00000443861 570 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN9O95484 AC091180.1-201ENST00000462104 372 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 AC074386.1-201ENST00000476560 767 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 AC108693.1-201ENST00000496068 432 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 AC113398.2-201ENST00000507630 558 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN9O95484 RPL7L1P4-201ENST00000513004 707 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 BX510359.5-201ENST00000515651 304 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN9O95484 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN9O95484 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN9O95484 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 AC008126.1-201ENST00000549019 480 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 AC109309.2-201ENST00000612597 332 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 MIR6837-201ENST00000620884 64 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN9O95484 AL049767.1-202ENST00000637826 242 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms