Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 AC007342.5-201ENST00000571340 2142 ntBASIC6.32□□□□□ -1.4
MBD4O95243 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MBD4O95243 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 U3.3-201ENST00000362986 216 ntBASIC6.32□□□□□ -1.4
MBD4O95243 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MBD4O95243 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 PEX12P1-201ENST00000400284 1048 ntBASIC6.32□□□□□ -1.4
MBD4O95243 RN7SKP126-201ENST00000411143 300 ntBASIC6.32□□□□□ -1.4
MBD4O95243 EI24P4-201ENST00000423683 1078 ntBASIC6.32□□□□□ -1.4
MBD4O95243 MTND4LP13-201ENST00000425022 298 ntBASIC6.32□□□□□ -1.4
MBD4O95243 AC009784.1-201ENST00000426484 460 ntBASIC6.32□□□□□ -1.4
MBD4O95243 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.32□□□□□ -1.4
MBD4O95243 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.32□□□□□ -1.4
MBD4O95243 OR5M14P-201ENST00000506803 618 ntBASIC6.32□□□□□ -1.4
MBD4O95243 SNORA70.11-201ENST00000515987 138 ntBASIC6.32□□□□□ -1.4
MBD4O95243 SNORA70.13-201ENST00000516116 138 ntBASIC6.32□□□□□ -1.4
MBD4O95243 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 AC134349.2-201ENST00000535136 910 ntBASIC6.32□□□□□ -1.4
MBD4O95243 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.32□□□□□ -1.4
MBD4O95243 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.32□□□□□ -1.4
MBD4O95243 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.32□□□□□ -1.4
MBD4O95243 AC007786.3-201ENST00000615154 596 ntBASIC6.32□□□□□ -1.4
MBD4O95243 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
MBD4O95243 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.32□□□□□ -1.4
MBD4O95243 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MBD4O95243 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 AC010266.2-201ENST00000564741 3255 ntBASIC6.31□□□□□ -1.4
MBD4O95243 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MBD4O95243 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 AP000473.2-201ENST00000602659 1537 ntBASIC6.31□□□□□ -1.4
MBD4O95243 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 AL589826.1-201ENST00000340697 249 ntBASIC6.31□□□□□ -1.4
MBD4O95243 RNU1-19P-201ENST00000363306 165 ntBASIC6.31□□□□□ -1.4
MBD4O95243 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.31□□□□□ -1.4
MBD4O95243 AL158827.1-201ENST00000416300 391 ntBASIC6.31□□□□□ -1.4
MBD4O95243 AL354868.1-201ENST00000417077 482 ntBASIC6.31□□□□□ -1.4
MBD4O95243 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 BX276092.6-201ENST00000430476 250 ntBASIC6.31□□□□□ -1.4
MBD4O95243 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 MRPS33P4-201ENST00000434892 317 ntBASIC6.31□□□□□ -1.4
MBD4O95243 PTMAP6-201ENST00000439110 327 ntBASIC6.31□□□□□ -1.4
MBD4O95243 MED28P3-201ENST00000444288 531 ntBASIC6.31□□□□□ -1.4
MBD4O95243 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 BX276092.8-201ENST00000455722 250 ntBASIC6.31□□□□□ -1.4
MBD4O95243 TPRKBP1-201ENST00000456243 481 ntBASIC6.31□□□□□ -1.4
MBD4O95243 AC079168.1-201ENST00000458741 345 ntBASIC6.31□□□□□ -1.4
MBD4O95243 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 CBX1P5-201ENST00000475330 559 ntBASIC6.31□□□□□ -1.4
MBD4O95243 RN7SL808P-201ENST00000496066 299 ntBASIC6.31□□□□□ -1.4
MBD4O95243 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.31□□□□□ -1.4
MBD4O95243 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 AC024940.3-201ENST00000538551 316 ntBASIC6.31□□□□□ -1.4
MBD4O95243 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 AL445222.1-201ENST00000607259 628 ntBASIC6.31□□□□□ -1.4
MBD4O95243 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
MBD4O95243 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MBD4O95243 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
MBD4O95243 AC020633.1-201ENST00000468439 2247 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms