Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC007342.5-201ENST00000571340 2142 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 MFSD8-213ENST00000641134 1327 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 AC007842.1-201ENST00000597336 2039 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM38O00635 RNU6-796P-201ENST00000391086 107 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 RSL24D1P1-201ENST00000404972 493 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 OR3A2-201ENST00000408891 1076 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM38O00635 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 RPL34P3-201ENST00000421454 338 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 PNRC2P1-201ENST00000423940 420 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 AC092447.3-201ENST00000426027 686 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 AL606517.1-201ENST00000446914 387 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 CYCSP20-201ENST00000473154 315 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 RPL21P47-201ENST00000483696 477 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 PPM1AP1-201ENST00000502740 1135 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 AC008638.1-201ENST00000506035 866 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 AC026782.2-201ENST00000510845 636 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM38O00635 SCARNA1-201ENST00000517138 166 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC013701.1-201ENST00000522657 465 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 OR8K4P-201ENST00000534608 872 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM38O00635 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM38O00635 AL049844.2-201ENST00000604280 628 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC079610.2-201ENST00000604818 690 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 LSM1P2-201ENST00000604911 322 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC104695.2-201ENST00000605056 775 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AL451086.1-201ENST00000605596 223 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 AP005229.2-201ENST00000609980 697 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC079776.5-201ENST00000641920 211 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM38O00635 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM38O00635 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 AC016583.1-201ENST00000624221 2431 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC239868.2-201ENST00000564237 4527 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 MIR133A2-201ENST00000347538 102 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 RN7SKP160-201ENST00000363804 340 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 U3.23-201ENST00000391132 200 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 AC016739.1-201ENST00000405359 345 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AL034374.1-201ENST00000406329 351 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 SSR1P2-201ENST00000415208 787 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC002504.1-201ENST00000438281 691 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 CUBNP2-201ENST00000443534 1139 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM38O00635 RPL23AP60-201ENST00000450011 454 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AL139824.2-201ENST00000458731 1095 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 EIF3LP3-201ENST00000495197 822 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 RPL5P23-201ENST00000496040 868 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AC008629.2-201ENST00000503783 483 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC133963.2-201ENST00000513686 578 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM38O00635 OR8Q1P-201ENST00000526467 655 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms