Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 MRPS6P2-201ENST00000381143 370 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 Y_RNA.582-201ENST00000391023 95 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 RNGTTP1-201ENST00000420965 728 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 YWHAZP2-201ENST00000440317 728 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC073109.1-201ENST00000445066 978 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 PFN1P11-201ENST00000445829 389 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC026336.1-201ENST00000466577 351 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC109462.1-201ENST00000491087 368 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 STMN1P2-201ENST00000508435 439 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 ARL2BPP6-201ENST00000512757 439 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 SNORA20.3-201ENST00000516880 132 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 CYCSP38-201ENST00000559840 322 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 UBE2FP2-201ENST00000566646 462 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AL117336.2-201ENST00000602435 335 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC098614.4-201ENST00000607601 462 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC104162.1-201ENST00000430831 2382 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC017104.4-201ENST00000636283 1592 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CTAGE11P-201ENST00000451540 2353 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LPAL2-203ENST00000454031 2498 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 RPL12P13-201ENST00000310055 497 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CBX3P1-201ENST00000325243 554 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 Y_RNA.311-201ENST00000365068 96 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 U3.52-201ENST00000384034 216 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 RNU6-1009P-201ENST00000390996 107 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC007066.1-201ENST00000392902 381 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AL354707.3-201ENST00000427308 331 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC146507.1-201ENST00000468335 354 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 MTCYBP17-201ENST00000503579 789 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 ZNF519P4-201ENST00000514008 125 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC022483.1-201ENST00000514020 567 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 OR5AK3P-201ENST00000527486 1297 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC092718.4-201ENST00000566639 716 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 MRPS21P9-201ENST00000571150 257 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC012065.4-201ENST00000602445 679 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 BNIP3P9-201ENST00000603714 553 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC010680.3-201ENST00000604215 520 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AC004908.1-201ENST00000606572 541 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AP005137.2-201ENST00000609238 400 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 AP004607.9-201ENST00000618202 316 ntBASIC8.24□□□□□ -1.09
ZC3H4Q9UPT8 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms