Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 RN7SKP128-201ENST00000364270 303 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 SUGT1P2-201ENST00000379452 992 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ZNF602P-201ENST00000405929 924 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 MIR1282-201ENST00000408865 101 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 RN7SKP166-201ENST00000410812 305 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 RPS3AP25-201ENST00000411660 793 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 HMGB3P31-201ENST00000413333 595 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 NPM1P18-201ENST00000434232 732 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC000041.1-201ENST00000439655 175 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 EIF5AP4-201ENST00000441206 465 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ACA64.4-201ENST00000459070 127 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC104164.1-201ENST00000460282 590 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC008629.2-201ENST00000503783 483 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC006499.4-201ENST00000510947 694 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 HMGB1P42-201ENST00000532126 553 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 OR4A43P-201ENST00000532938 908 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC244502.2-201ENST00000543361 851 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AL358913.1-201ENST00000554342 121 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 MTCYBP23-201ENST00000558717 1102 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ZNF971P-201ENST00000562068 1249 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC022884.3-201ENST00000579571 248 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ZNF849P-201ENST00000594711 1566 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 VN1R87P-201ENST00000596706 487 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AL158152.1-201ENST00000602652 1435 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AP002906.1-201ENST00000603405 233 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.61□□□□□ -1.51
NECTIN3Q9NQS3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL034546.1-201ENST00000623740 3693 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 SELENOWP1-201ENST00000322792 252 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 RPS10P18-201ENST00000442662 495 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 BMS1P10-201ENST00000443754 1120 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL162739.1-201ENST00000450606 307 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC118282.1-201ENST00000506408 765 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms