Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
HMG20AQ9NP66 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HMG20AQ9NP66 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC027290.2-201ENST00000623210 18662 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC005294.1-201ENST00000355509 281 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC023490.2-201ENST00000359859 470 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 RN7SKP104-201ENST00000362605 328 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 MIR551A-201ENST00000385042 96 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 GAPDHP42-201ENST00000406848 981 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 RN7SKP240-201ENST00000410583 375 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AL450996.1-201ENST00000445574 1202 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AP000547.1-201ENST00000454360 617 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 DEFB109F-201ENST00000491870 277 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 EIF4A2P5-201ENST00000529914 499 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 GSTP1P1-201ENST00000548078 319 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 GLRXP2-201ENST00000555594 321 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC016252.1-201ENST00000609721 474 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AL096712.1-201ENST00000614561 159 ntBASIC4.66□□□□□ -1.66
HMG20AQ9NP66 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMG20AQ9NP66 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.65□□□□□ -1.66
HMG20AQ9NP66 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMG20AQ9NP66 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 RN7SKP6-201ENST00000364795 319 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 MIR589-201ENST00000385238 99 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AL121834.1-202ENST00000404494 277 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 HMGN1P20-201ENST00000411849 300 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 NMNAT1P2-201ENST00000435192 860 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 TMX2P1-201ENST00000436507 708 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 RPS26P2-201ENST00000440331 348 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 RN7SL515P-201ENST00000463999 297 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 RN7SL741P-201ENST00000482473 289 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 SNORA43.3-201ENST00000517240 103 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 NANOGNBP2-201ENST00000544753 553 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 RN7SL356P-201ENST00000582228 248 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AL499605.1-201ENST00000604628 403 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 MIR193BHG-214ENST00000641765 509 ntBASIC4.65□□□□□ -1.67
HMG20AQ9NP66 AC008691.1-209ENST00000642094 814 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms