Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RPL7P6-201ENST00000480903 738 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 RN7SL184P-201ENST00000488308 297 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 OR9N1P-201ENST00000491296 333 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 RNU6-941P-201ENST00000516346 108 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC126177.5-201ENST00000549599 178 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC122134.1-201ENST00000565664 1104 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 SNORD95-201ENST00000579879 68 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC118658.2-201ENST00000618697 459 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC026124.2-201ENST00000621847 656 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 KARSP1-201ENST00000451871 1752 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 MIR143-201ENST00000385300 106 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 SNORA11.5-201ENST00000408163 128 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AL513325.1-201ENST00000417716 1034 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC245028.2-201ENST00000458673 253 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 RPS27AP18-201ENST00000515536 459 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 NPM1P52-201ENST00000518264 846 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC007204.2-201ENST00000615022 616 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC40Q9H9A6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 MIR323A-201ENST00000362199 86 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 RNA5SP242-201ENST00000364171 118 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 RNA5SP132-201ENST00000364725 118 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 RNA5SP90-201ENST00000364801 99 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 SNORA67-201ENST00000384423 137 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AC093655.2-201ENST00000425735 631 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 MTCO3P17-201ENST00000443775 513 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 CYCSP24-201ENST00000445119 316 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 SETP20-201ENST00000457046 852 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AC108161.1-201ENST00000461060 402 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AL136038.1-201ENST00000497246 351 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 UGT2A3P7-201ENST00000510485 734 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
LRRC40Q9H9A6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 SAMMSON-213ENST00000641336 1521 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms