Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC012519.1-201ENST00000424588 610 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 FAR2P4-202ENST00000425399 584 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 VN1R21P-201ENST00000426703 765 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RPS11P7-201ENST00000442125 465 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 OR7E116P-201ENST00000448529 957 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 FAR2P1-206ENST00000449736 709 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RANP1-206ENST00000455094 651 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RPS17P15-201ENST00000475609 349 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC072052.1-201ENST00000496556 306 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RPS17P5-201ENST00000498293 408 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RNU6-615P-201ENST00000516065 106 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 OR4A17P-201ENST00000526032 904 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 HMGN2P36-201ENST00000529541 409 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 OR5D15P-201ENST00000531671 942 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AP004607.2-201ENST00000533949 322 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 DHFRP1-201ENST00000579682 559 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC087763.1-201ENST00000603391 286 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 SUGT1P3-202ENST00000604259 383 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC091932.2-201ENST00000623014 291 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC136428.4-201ENST00000634254 1155 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM4Q9C037 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM4Q9C037 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC120338.1-201ENST00000625074 1541 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AL513548.1-201ENST00000562904 1724 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AL159987.1-201ENST00000347911 293 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 RNU1-146P-201ENST00000364015 165 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 VDAC2P1-201ENST00000399358 958 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC096921.1-201ENST00000411661 375 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 NIFKP3-201ENST00000417799 865 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AL358176.3-201ENST00000420757 454 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 OR10T1P-201ENST00000424327 947 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 RPL7L1P9-201ENST00000431298 745 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC006466.1-201ENST00000438721 289 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 HIGD1AP8-201ENST00000453927 274 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 RPS18P6-201ENST00000476880 458 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC007686.1-201ENST00000488511 463 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC021193.1-201ENST00000511607 420 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 IGBP1P1-201ENST00000554337 1009 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 HSPE1P2-201ENST00000554777 306 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 RN7SL290P-201ENST00000578661 300 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AF230666.2-201ENST00000602328 725 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC133644.2-201ENST00000608142 540 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 uc_338.18-201ENST00000615451 175 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM4Q9C037 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM4Q9C037 AC114947.2-201ENST00000565748 2125 ntBASIC5.38□□□□□ -1.55
TRIM4Q9C037 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AL360270.2-201ENST00000562952 5985 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms