Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 U3.3-201ENST00000362986 216 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 RNA5SP90-201ENST00000364801 99 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 U3.32-201ENST00000408116 212 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 HMGN2P27-201ENST00000427352 270 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 BX842559.2-201ENST00000451418 605 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 HIGD1AP8-201ENST00000453927 274 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 RN7SL447P-201ENST00000494711 245 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC008953.1-201ENST00000497334 318 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC020937.1-201ENST00000519677 1013 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC127024.5-201ENST00000580085 462 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 ELOCP28-201ENST00000590044 317 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AC108359.1-201ENST00000616451 1211 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 AP001784.1-201ENST00000624107 428 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 SAMMSON-209ENST00000641222 1100 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 OR9K1P-202ENST00000641111 3217 ntBASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF3BQ9BZI7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC006484.1-201ENST00000435086 1884 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 RNU1-74P-201ENST00000384108 171 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC006466.1-201ENST00000438721 289 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 RPL7P40-201ENST00000481703 745 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 UBA52P7-201ENST00000486088 380 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC093267.1-201ENST00000489176 961 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 ENPP7P11-201ENST00000505915 627 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 GTF2IP11-201ENST00000526931 420 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AP000676.2-201ENST00000529711 301 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AL445222.1-201ENST00000607259 628 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 AL078595.2-201ENST00000605309 1780 ntBASIC6.16□□□□□ -1.42
UPF3BQ9BZI7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 MAPK10-338ENST00000641647 3362 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 SNORA56-201ENST00000383966 129 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AL390316.1-201ENST00000406279 553 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 FAM96AP1-201ENST00000430879 482 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC020779.1-201ENST00000478757 796 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC015864.1-201ENST00000496512 544 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC097173.1-201ENST00000505862 819 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC010487.1-201ENST00000594408 1172 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AP005432.2-201ENST00000608162 586 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 AL139407.1-201ENST00000613826 1175 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms