Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Z80107.2-201ENST00000445127 392 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC092324.1-201ENST00000468671 324 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 LSM3P2-201ENST00000551246 273 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 MIR4480-201ENST00000582492 71 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC011626.1-201ENST00000604710 562 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC093799.2-201ENST00000610062 578 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AP005131.7-201ENST00000610087 611 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 MIR6810-201ENST00000622701 70 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 SEPT7P2-202ENST00000398921 823 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AL807761.1-201ENST00000417622 171 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 RPS4XP16-201ENST00000427198 791 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AC104837.2-201ENST00000427236 424 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AL360081.1-201ENST00000428299 555 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AC073648.4-201ENST00000442655 781 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AC007686.1-201ENST00000488511 463 ntBASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPAP1Q9BWH6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC003985.2-201ENST00000562268 1669 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNU1-74P-201ENST00000384108 171 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RPS3AP53-201ENST00000454716 778 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC105233.1-201ENST00000498840 781 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 OR51K1P-201ENST00000510214 950 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC012400.1-201ENST00000518452 381 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 MIR3934-201ENST00000579806 107 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 MIR4433B-201ENST00000581329 102 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 ELOCP28-201ENST00000590044 317 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AL627230.1-201ENST00000613077 211 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 AL591926.8-201ENST00000616876 211 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 TRIM51GP-201ENST00000534741 1350 ntBASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RPAP1Q9BWH6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
RPAP1Q9BWH6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 SNORA51.8-201ENST00000384234 132 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 OR8V1P-201ENST00000395193 873 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AL035419.1-201ENST00000397037 564 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 FABP12P1-201ENST00000401911 322 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 MIR1182-201ENST00000408363 97 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms