Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 NCSTNP1-201ENST00000406229 144 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 RNA5SP155-201ENST00000411154 129 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC068533.2-201ENST00000411872 306 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AL390774.1-201ENST00000411924 246 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 RPS26P38-201ENST00000414476 348 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 Z99497.1-201ENST00000421282 135 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AKR1B10P1-201ENST00000425765 942 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC010881.1-201ENST00000433830 235 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC099670.1-201ENST00000455141 783 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 RN7SL834P-201ENST00000461450 286 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC083806.1-201ENST00000468934 316 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC026254.2-201ENST00000475295 371 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC068724.1-201ENST00000487100 792 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ARL4AP1-201ENST00000503220 705 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC095057.1-201ENST00000507583 168 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 Y_RNA.695-201ENST00000516715 107 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 IGKV2D-38-201ENST00000518423 240 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 SOD1P3-201ENST00000518682 454 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 RPL12P22-201ENST00000519073 490 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC239860.2-201ENST00000525886 270 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC090236.2-201ENST00000587933 1101 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC119751.7-201ENST00000600494 245 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 WISP1-OT1-201ENST00000602893 642 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AL590032.1-201ENST00000604920 252 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC004908.1-201ENST00000606572 541 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC090425.2-201ENST00000608818 501 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 MIR6503-201ENST00000622884 86 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AC217777.1-201ENST00000570034 1471 ntBASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRAIPQ9BWF2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 AC027228.2-201ENST00000567141 2154 ntBASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
TRAIPQ9BWF2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 DLEU2L-201ENST00000371086 3555 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 RNA5SP308-201ENST00000362532 115 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 RNU6-216P-201ENST00000363282 104 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 VIM2P-201ENST00000402383 1294 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL138880.1-201ENST00000405824 642 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL590635.1-201ENST00000406314 586 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 MTND1P20-201ENST00000430341 950 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms