Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL391834.1-201ENST00000609609 560 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC105105.5-201ENST00000622635 1294 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AL355480.1-201ENST00000629041 99 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 SNORA17.5-201ENST00000630429 132 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKP4Q99569 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC132825.1-201ENST00000463573 2247 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.35□□□□□ -1.55
PKP4Q99569 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 KARSP1-201ENST00000451871 1752 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC109446.4-201ENST00000623235 2755 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PKP4Q99569 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 RNA5SP435-201ENST00000364044 108 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.34□□□□□ -1.55
PKP4Q99569 SNORA16A-201ENST00000384342 137 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 RNU6-925P-201ENST00000384629 104 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PKP4Q99569 RNA5SP178-201ENST00000410380 128 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AL133482.1-201ENST00000415988 498 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC007064.3-201ENST00000422608 359 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 UBE2V1P6-201ENST00000430840 422 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AL389925.1-201ENST00000432257 728 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 MAPRE1P3-201ENST00000435438 796 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC023271.1-201ENST00000445936 1090 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 SETP20-201ENST00000457046 852 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP4Q99569 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC021106.1-201ENST00000509020 1058 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC018442.3-201ENST00000523025 183 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC079064.1-201ENST00000528365 362 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AL359715.3-201ENST00000569267 2123 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 SNX6P1-201ENST00000601728 1224 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC019131.2-201ENST00000609071 870 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AL391834.2-201ENST00000609982 546 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 MIR6133-201ENST00000617057 108 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AC022960.3-201ENST00000619794 441 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AL133370.2-201ENST00000619934 439 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 AL691477.1-201ENST00000624398 162 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP4Q99569 AC006927.4-201ENST00000639187 543 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 AL022311.1-201ENST00000623726 19416 ntBASIC5.34□□□□□ -1.55
PKP4Q99569 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.34□□□□□ -1.55
PKP4Q99569 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKP4Q99569 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PKP4Q99569 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PKP4Q99569 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PKP4Q99569 AC007342.7-201ENST00000624610 2337 ntBASIC5.34□□□□□ -1.56
PKP4Q99569 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
PKP4Q99569 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms