Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS35Q96QK1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS35Q96QK1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.27□□□□□ -1.57
VPS35Q96QK1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS35Q96QK1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VPS35Q96QK1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC021242.1-201ENST00000507315 2035 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 MIR105-1-201ENST00000385222 81 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 SNORA48.4-201ENST00000391089 134 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC002524.1-201ENST00000411687 547 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 RPL35AP24-201ENST00000413846 330 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 RPL7AP49-201ENST00000429522 581 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AL591438.1-201ENST00000433508 581 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 OR52B5P-201ENST00000435337 951 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 SNRPFP2-201ENST00000440710 251 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC104634.1-201ENST00000452720 462 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 SEPT7P3-201ENST00000455017 621 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC091544.1-201ENST00000484702 348 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC022133.1-201ENST00000490961 571 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 RN7SL591P-201ENST00000496150 292 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC015864.1-201ENST00000496512 544 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC106730.2-201ENST00000566641 540 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC067838.1-201ENST00000606064 577 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AL512624.1-201ENST00000613638 469 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 OR52B5P-202ENST00000641118 1110 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 AC092376.2-201ENST00000622621 4116 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 THAP12P5-201ENST00000405864 2275 ntBASIC5.26□□□□□ -1.57
VPS35Q96QK1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS35Q96QK1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS35Q96QK1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC235565.1-201ENST00000456962 1325 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC245100.2-201ENST00000454544 1679 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 Y_RNA.62-201ENST00000362840 99 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 U3.2-201ENST00000362981 210 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 RN7SKP153-201ENST00000365026 316 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC234781.4-201ENST00000419384 244 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 MARK2P12-201ENST00000420129 585 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 NPM1P22-201ENST00000427761 952 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AL136231.1-201ENST00000429407 730 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 RN7SL172P-201ENST00000460535 303 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC018638.3-201ENST00000461273 132 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 RN7SL30P-201ENST00000488416 306 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 RPS12P31-201ENST00000491419 398 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC069304.1-201ENST00000491593 704 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 RPS4XP20-201ENST00000505751 772 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AL671862.1-201ENST00000515851 349 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC084033.1-201ENST00000550830 633 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 MTCO1P1-201ENST00000624263 1081 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 CYP4F35P-202ENST00000636121 390 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS35Q96QK1 CR788268.1-201ENST00000603931 1809 ntBASIC5.25□□□□□ -1.57
VPS35Q96QK1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS35Q96QK1 MTND5P23-201ENST00000430812 1655 ntBASIC5.24□□□□□ -1.57
VPS35Q96QK1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms