Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 RNA5SP90-201ENST00000364801 99 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SEPT10P1-201ENST00000517342 1162 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SNORA2.3-201ENST00000383920 135 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SNORD56.6-201ENST00000384569 71 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 RNU1-103P-201ENST00000516502 125 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 RN7SL703P-201ENST00000578485 302 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 U3.10-201ENST00000364459 214 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 SNORA62.3-201ENST00000365110 153 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 H3F3BP1-201ENST00000440551 403 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC108463.1-201ENST00000450258 347 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RN7SL188P-201ENST00000469842 285 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RPL7P40-201ENST00000481703 745 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC107016.1-201ENST00000550463 337 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC022146.1-201ENST00000595307 847 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC006210.2-201ENST00000367074 1545 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 U3.28-201ENST00000391249 210 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CDY14P-201ENST00000431260 1014 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 NRBF2P3-201ENST00000432731 865 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CDY12P-201ENST00000440679 1015 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 OR7E125P-201ENST00000443450 846 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CDY13P-201ENST00000445813 1015 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CDY23P-201ENST00000451661 1014 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 MAPK10-328ENST00000641553 4009 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AL590762.2-201ENST00000395798 571 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC097523.2-201ENST00000435551 652 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms