Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MRE11P1-201ENST00000464884 2127 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 IFIT1P1-201ENST00000400497 1449 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 MIR375-201ENST00000362103 64 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RNA5SP131-201ENST00000365452 119 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AL672167.2-201ENST00000377164 879 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 SUGT1P2-201ENST00000379452 992 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC005522.1-201ENST00000395416 346 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RPS3AP2-201ENST00000407190 754 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 OR51A6P-201ENST00000418680 1004 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AL450996.1-201ENST00000445574 1202 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC068491.1-201ENST00000449539 1241 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 DNAJB5P1-201ENST00000454004 806 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RPS23P6-201ENST00000466136 431 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC098818.1-201ENST00000478593 252 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC044810.1-201ENST00000480271 711 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RPL7P41-201ENST00000485823 957 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RN7SL814P-201ENST00000487715 300 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RPL15P21-201ENST00000495592 567 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC011411.1-201ENST00000509592 876 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 OR5H7P-201ENST00000514084 930 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 HSD3BP3-201ENST00000514706 994 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RNA5SP438-201ENST00000516561 112 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RN7SKP99-201ENST00000517028 307 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC116917.1-201ENST00000520558 305 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 DYNLL1P4-201ENST00000549314 266 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AL845552.1-201ENST00000556820 323 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 MRPS21P7-201ENST00000566937 238 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AP005119.2-201ENST00000579735 1105 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 MIR6737-201ENST00000617385 70 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AL133243.3-201ENST00000617415 3004 ntBASIC3.87□□□□□ -1.79
AP1S3Q96PC3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.87□□□□□ -1.79
AP1S3Q96PC3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 LINC02471-203ENST00000641941 4752 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 RNA5SP273-201ENST00000362484 113 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 RNA5SP477-201ENST00000362639 119 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MIR589-201ENST00000385238 99 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 HSPA8P15-201ENST00000401676 786 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 SNRPFP2-201ENST00000440710 251 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AP000547.1-201ENST00000454360 617 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC122718.2-201ENST00000505325 591 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC025458.1-201ENST00000506046 166 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.86□□□□□ -1.79
AP1S3Q96PC3 DPPA2P4-201ENST00000563717 878 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC092121.1-201ENST00000569452 202 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AP001496.3-201ENST00000580230 913 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 RN7SL708P-201ENST00000580952 299 ntBASIC3.86□□□□□ -1.79
AP1S3Q96PC3 AC005479.3-201ENST00000602790 431 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms