Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC009163.6-201ENST00000612367 342 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 MIR7155-201ENST00000615925 56 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AC015660.5-201ENST00000623238 564 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 THAP12P4-201ENST00000528321 2266 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 CDC27P2-201ENST00000425026 1922 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 HSPA8P18-201ENST00000439846 1928 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 SNORA5.1-201ENST00000384275 131 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 SNORA70-201ENST00000384436 135 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC234781.4-201ENST00000419384 244 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AL136231.1-201ENST00000429407 730 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 PTMAP6-201ENST00000439110 327 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC073850.1-201ENST00000449243 255 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC020779.1-201ENST00000478757 796 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 OR5M14P-201ENST00000506803 618 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 FTH1P11-201ENST00000517577 551 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC006272.2-201ENST00000594725 163 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AL445222.1-201ENST00000607259 628 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AL451049.1-201ENST00000608672 497 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AC068870.2-201ENST00000620635 389 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 AP001029.2-203ENST00000589795 4910 ntBASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ECHDC3Q96DC8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 NXF4-202ENST00000416098 1465 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 RNU6-249P-201ENST00000363016 102 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 RNA5SP223-201ENST00000365174 120 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AL645927.1-201ENST00000396783 406 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC046176.1-201ENST00000435260 1170 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 CBX1P2-201ENST00000453841 458 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 RPL7AP6-201ENST00000477943 801 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 RN7SL808P-201ENST00000496066 299 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC013701.1-201ENST00000522657 465 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC044860.2-201ENST00000561005 179 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC022884.2-201ENST00000578535 580 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC087763.1-201ENST00000603391 286 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC211433.2-201ENST00000608433 387 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AL627230.1-201ENST00000613077 211 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AC037198.3-201ENST00000616754 526 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AL591926.8-201ENST00000616876 211 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AP002799.1-201ENST00000623552 423 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms