Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR323B-201ENST00000385269 82 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 RPS3AP2-201ENST00000407190 754 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL445213.1-201ENST00000412589 747 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MTND4LP7-201ENST00000431728 294 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC046176.1-201ENST00000435260 1170 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL450996.1-201ENST00000445574 1202 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 NOP56P2-201ENST00000447491 769 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 RPL31P20-201ENST00000449593 360 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AP006222.1-205ENST00000450734 457 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 SETP20-201ENST00000457046 852 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MTND2P39-201ENST00000457230 764 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC022133.1-201ENST00000490961 571 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC104109.1-201ENST00000498563 436 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 PSMA2P2-201ENST00000504319 686 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC112206.4-201ENST00000515142 405 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 RFPL4AP3-201ENST00000515267 345 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC022826.1-201ENST00000519383 805 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 IGKV3D-34-201ENST00000522638 302 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC068993.1-201ENST00000546724 589 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC135803.1-201ENST00000608748 565 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MIR6862-1-201ENST00000613016 70 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MIR6862-2-201ENST00000614755 70 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL118522.2-201ENST00000616045 615 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC006249.1-201ENST00000621223 471 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AC114786.1-201ENST00000512892 1415 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RN7SKP153-201ENST00000365026 316 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 SNORA16A-201ENST00000384342 137 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC092642.1-201ENST00000392417 425 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AL031985.1-201ENST00000392713 418 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 SEPT7P8-201ENST00000413308 775 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 PCNPP4-201ENST00000414817 517 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AL133173.1-201ENST00000423458 397 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC104843.2-201ENST00000427666 297 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 MTCO1P45-201ENST00000431457 267 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 VN1R48P-201ENST00000448149 1036 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RAB28P3-201ENST00000448325 597 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 MTND2P25-201ENST00000449028 610 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AL672138.1-201ENST00000450604 1015 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RPL7P41-201ENST00000485823 957 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RPL7P51-201ENST00000490532 749 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 MTND3P3-201ENST00000505004 126 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 MTATP6P1-201ENST00000514057 681 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 RNU6-319P-201ENST00000516025 108 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 OR4A46P-201ENST00000527255 933 ntBASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A1Q8WWI5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms