Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC009597.2-201ENST00000604659 592 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 WBP1LP8-201ENST00000617401 327 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 SMG1P7-201ENST00000565246 2704 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 RNA5SP223-201ENST00000365174 120 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 RN7SKP126-201ENST00000411143 300 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 NPM1P40-201ENST00000412758 733 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC012512.1-201ENST00000446594 718 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC239367.2-201ENST00000447309 705 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC020898.1-201ENST00000474167 787 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC016559.2-201ENST00000510759 359 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC073136.1-201ENST00000449426 2884 ntBASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SHROOM3Q8TF72 AC068538.1-201ENST00000376856 336 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC008072.1-201ENST00000434254 824 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 NUTF2P7-201ENST00000453086 375 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 Z92846.1-201ENST00000456203 268 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC097173.1-201ENST00000505862 819 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 NXF4-202ENST00000416098 1465 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AL049693.1-201ENST00000402760 611 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 U3.32-201ENST00000408116 212 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC098976.1-201ENST00000513014 541 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC005084.1-201ENST00000605160 304 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC083809.1-201ENST00000615051 472 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 AP002512.4-202ENST00000641599 4530 ntBASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM3Q8TF72 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AC114947.2-201ENST00000565748 2125 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AC108751.3-201ENST00000461814 1020 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms