Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC018690.1-201ENST00000608144 626 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.99□□□□□ -1.45
GABPAQ06546 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.98□□□□□ -1.45
GABPAQ06546 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.98□□□□□ -1.45
GABPAQ06546 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.98□□□□□ -1.45
GABPAQ06546 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 CASC19-221ENST00000641309 1382 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 RN7SKP113-201ENST00000363891 295 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 SNORA2.3-201ENST00000383920 135 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 ATP5HP3-201ENST00000396994 486 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 SNORA77-201ENST00000408716 125 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.98□□□□□ -1.45
GABPAQ06546 AL355994.1-201ENST00000424379 260 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.98□□□□□ -1.45
GABPAQ06546 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.98□□□□□ -1.45
GABPAQ06546 AC006466.1-201ENST00000438721 289 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.98□□□□□ -1.45
GABPAQ06546 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
GABPAQ06546 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 AC108359.1-201ENST00000616451 1211 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.98□□□□□ -1.45
GABPAQ06546 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
GABPAQ06546 AP001153.1-201ENST00000641024 338 ntBASIC5.98□□□□□ -1.45
GABPAQ06546 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GABPAQ06546 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.97□□□□□ -1.45
GABPAQ06546 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 ABCC13-202ENST00000463099 3842 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GABPAQ06546 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GABPAQ06546 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GABPAQ06546 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.97□□□□□ -1.45
GABPAQ06546 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GABPAQ06546 OR1L6-202ENST00000373684 1044 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 AL354868.1-201ENST00000417077 482 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.97□□□□□ -1.45
GABPAQ06546 AL772161.1-201ENST00000439130 476 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 RPS29P9-201ENST00000440360 171 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.97□□□□□ -1.45
GABPAQ06546 AC073648.4-201ENST00000442655 781 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GABPAQ06546 COX6B1P2-201ENST00000489624 230 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.97□□□□□ -1.45
GABPAQ06546 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.97□□□□□ -1.45
GABPAQ06546 RN7SL290P-201ENST00000578661 300 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 MIR4737-201ENST00000583979 81 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.97□□□□□ -1.45
GABPAQ06546 AL157762.1-201ENST00000619612 415 ntBASIC5.97□□□□□ -1.45
GABPAQ06546 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GABPAQ06546 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.97□□□□□ -1.45
GABPAQ06546 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GABPAQ06546 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 BX284613.1-201ENST00000452221 1641 ntBASIC5.96□□□□□ -1.45
GABPAQ06546 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GABPAQ06546 Z95114.1-201ENST00000624264 14574 ntBASIC5.96□□□□□ -1.45
GABPAQ06546 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 RN7SKP103-201ENST00000363848 320 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 GPS2P1-201ENST00000411761 986 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 USP9YP9-201ENST00000429406 715 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 AC005412.2-201ENST00000492004 341 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.96□□□□□ -1.46
GABPAQ06546 AC073342.3-201ENST00000624211 193 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.96□□□□□ -1.46
GABPAQ06546 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.96□□□□□ -1.46
GABPAQ06546 AC132825.1-201ENST00000463573 2247 ntBASIC5.96□□□□□ -1.46
GABPAQ06546 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms