Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC022336.1-201ENST00000475510 337 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 TRBV5-2-201ENST00000489095 273 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC073610.1-201ENST00000489971 396 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.54□□□□□ -1.52
LIMK1P53667 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 snoU109.5-201ENST00000516231 132 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC109635.6-201ENST00000525487 1113 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 AP002373.2-201ENST00000541631 1060 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC137768.1-201ENST00000549998 553 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AL512310.9-201ENST00000553311 948 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 MIR3934-201ENST00000579806 107 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC096553.1-201ENST00000605169 829 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.54□□□□□ -1.52
LIMK1P53667 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 AC087565.3-202ENST00000642085 1603 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 AL356317.1-201ENST00000396110 1436 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
LIMK1P53667 THAP12P9-201ENST00000503971 2360 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LIMK1P53667 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LIMK1P53667 RNU6-670P-201ENST00000364312 104 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 RNA5SP30-201ENST00000365552 115 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 SNORA67-201ENST00000384423 137 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 RNA5SP339-201ENST00000390987 122 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC093162.1-201ENST00000419682 124 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 NPM1P26-201ENST00000426339 738 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC099670.2-201ENST00000435130 321 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 VDAC2P4-201ENST00000452925 711 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC009963.2-201ENST00000453431 138 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC090602.1-201ENST00000469695 252 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 RPEP1-201ENST00000504507 658 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 RFPL4AP5-201ENST00000514977 504 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LIMK1P53667 TPM3P3-201ENST00000521343 354 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC013701.1-201ENST00000522657 465 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 OR4V1P-201ENST00000525394 1140 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC126615.2-201ENST00000553003 515 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.53□□□□□ -1.52
LIMK1P53667 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.53□□□□□ -1.52
LIMK1P53667 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 uc_338.26-201ENST00000612659 160 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC090607.5-201ENST00000615692 224 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AL355974.3-201ENST00000617383 467 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 OR51C1P-202ENST00000641159 1444 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK1P53667 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
LIMK1P53667 BTBD10P1-201ENST00000549824 1352 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 HSPA8P14-201ENST00000552265 1805 ntBASIC5.53□□□□□ -1.52
LIMK1P53667 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.53□□□□□ -1.52
LIMK1P53667 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK1P53667 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LIMK1P53667 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LIMK1P53667 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 RNU1-74P-201ENST00000384108 171 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 TRIM60P13-201ENST00000432350 1283 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms