Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC068870.1-201ENST00000563737 2455 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC106730.2-201ENST00000566641 540 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 MRPS21P8-201ENST00000569196 235 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 RN7SL290P-201ENST00000578661 300 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC127024.5-201ENST00000580085 462 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 MIR5010-201ENST00000582846 120 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC079610.2-201ENST00000604818 690 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC097504.2-201ENST00000608088 454 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 MIR8084-201ENST00000614105 89 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC093875.1-201ENST00000623688 504 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NKX2-1P43699 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NKX2-1P43699 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.59□□□□□ -1.68
NKX2-1P43699 AC006206.1-201ENST00000544842 3387 ntBASIC4.59□□□□□ -1.68
NKX2-1P43699 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
NKX2-1P43699 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC027228.2-201ENST00000567141 2154 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 CASC19-261ENST00000641853 1638 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 OR4K17-201ENST00000315543 1032 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 RNU6-185P-201ENST00000384421 107 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 MIR188-201ENST00000385034 86 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
NKX2-1P43699 UBE2V1P11-201ENST00000411559 285 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 RPL35AP3-201ENST00000414680 288 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC092570.3-201ENST00000420113 693 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AL035458.1-201ENST00000433096 585 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 RN7SL269P-201ENST00000467795 305 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AP002453.1-201ENST00000492327 668 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 ENPP7P11-201ENST00000505915 627 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 HMGN1P16-201ENST00000508308 283 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 HIGD1AP18-201ENST00000520730 278 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC018442.3-201ENST00000523025 183 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 CIR1P1-201ENST00000524055 1133 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 OR5AM1P-201ENST00000532136 1032 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC008083.2-201ENST00000546707 476 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC091078.2-201ENST00000557145 559 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-1P43699 MIR744-201ENST00000578242 98 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC124283.4-201ENST00000581815 456 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AF129408.1-201ENST00000608767 431 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC015819.1-201ENST00000613588 663 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC104763.3-201ENST00000613765 618 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC018926.1-201ENST00000616335 435 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 AC095038.2-201ENST00000621464 1070 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 uc_338.7-201ENST00000621834 124 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC091932.2-201ENST00000623014 291 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 AL078621.3-201ENST00000623707 2042 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 AC011755.1-201ENST00000623763 2049 ntBASIC4.58□□□□□ -1.68
NKX2-1P43699 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-1P43699 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-1P43699 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms