Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 RNA5SP284-201ENST00000384547 118 ntBASIC5.67□□□□□ -1.5
SSR1P43307 RNA5SP241-201ENST00000391326 114 ntBASIC5.67□□□□□ -1.5
SSR1P43307 HMGB3P7-201ENST00000400214 611 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.67□□□□□ -1.5
SSR1P43307 AC093155.2-201ENST00000420734 937 ntBASIC5.67□□□□□ -1.5
SSR1P43307 RPL19P16-201ENST00000433839 588 ntBASIC5.67□□□□□ -1.5
SSR1P43307 GSTM5P1-201ENST00000434751 660 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AL138899.2-201ENST00000439139 499 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.67□□□□□ -1.5
SSR1P43307 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 YWHAEP1-201ENST00000453697 763 ntBASIC5.67□□□□□ -1.5
SSR1P43307 RPL5P30-201ENST00000465511 891 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC138866.2-201ENST00000508650 584 ntBASIC5.67□□□□□ -1.5
SSR1P43307 SEPT10P1-201ENST00000517342 1162 ntBASIC5.67□□□□□ -1.5
SSR1P43307 MTCYBP19-201ENST00000517463 1124 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.67□□□□□ -1.5
SSR1P43307 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 OR11H3P-201ENST00000554547 982 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC106730.2-201ENST00000566641 540 ntBASIC5.67□□□□□ -1.5
SSR1P43307 NDUFA5P11-201ENST00000567995 343 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC010547.7-201ENST00000570323 333 ntBASIC5.67□□□□□ -1.5
SSR1P43307 MIR4505-201ENST00000582238 73 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC087283.1-201ENST00000604029 1074 ntBASIC5.67□□□□□ -1.5
SSR1P43307 QTRT1P1-201ENST00000604344 1078 ntBASIC5.67□□□□□ -1.5
SSR1P43307 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 AC244107.2-201ENST00000611773 76 ntBASIC5.67□□□□□ -1.5
SSR1P43307 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 MIR6778-201ENST00000617912 73 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC135068.5-201ENST00000624197 983 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC007683.2-201ENST00000624681 714 ntBASIC5.67□□□□□ -1.5
SSR1P43307 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 AL929601.4-201ENST00000613011 1341 ntBASIC5.67□□□□□ -1.5
SSR1P43307 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.67□□□□□ -1.5
SSR1P43307 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSR1P43307 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.66□□□□□ -1.5
SSR1P43307 RNU1-19P-201ENST00000363306 165 ntBASIC5.66□□□□□ -1.5
SSR1P43307 OR1L6-202ENST00000373684 1044 ntBASIC5.66□□□□□ -1.5
SSR1P43307 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.66□□□□□ -1.5
SSR1P43307 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 HSPA8P15-201ENST00000401676 786 ntBASIC5.66□□□□□ -1.5
SSR1P43307 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.66□□□□□ -1.5
SSR1P43307 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.66□□□□□ -1.5
SSR1P43307 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 AC002504.1-201ENST00000438281 691 ntBASIC5.66□□□□□ -1.5
SSR1P43307 AC064862.4-201ENST00000442180 334 ntBASIC5.66□□□□□ -1.5
SSR1P43307 GEMIN8P3-201ENST00000445417 720 ntBASIC5.66□□□□□ -1.5
SSR1P43307 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.66□□□□□ -1.5
SSR1P43307 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.66□□□□□ -1.5
SSR1P43307 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.66□□□□□ -1.5
SSR1P43307 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 RPL10P17-201ENST00000453852 316 ntBASIC5.66□□□□□ -1.5
SSR1P43307 APOOP2-201ENST00000461561 539 ntBASIC5.66□□□□□ -1.5
SSR1P43307 RN7SL51P-201ENST00000468230 285 ntBASIC5.66□□□□□ -1.5
SSR1P43307 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 AC007998.1-201ENST00000474156 672 ntBASIC5.66□□□□□ -1.5
SSR1P43307 AC093827.1-201ENST00000480094 861 ntBASIC5.66□□□□□ -1.5
SSR1P43307 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.66□□□□□ -1.5
SSR1P43307 PGBD4P4-201ENST00000509673 613 ntBASIC5.66□□□□□ -1.5
SSR1P43307 BTG4P1-201ENST00000510421 183 ntBASIC5.66□□□□□ -1.5
SSR1P43307 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.66□□□□□ -1.5
SSR1P43307 AC022826.1-201ENST00000519383 805 ntBASIC5.66□□□□□ -1.5
SSR1P43307 AC092709.1-201ENST00000521355 1045 ntBASIC5.66□□□□□ -1.5
SSR1P43307 SULT1C2P2-201ENST00000562517 294 ntBASIC5.66□□□□□ -1.5
SSR1P43307 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.66□□□□□ -1.5
SSR1P43307 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
SSR1P43307 AC023813.4-201ENST00000607580 580 ntBASIC5.66□□□□□ -1.5
SSR1P43307 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 SCARNA15-201ENST00000607520 4325 ntBASIC5.66□□□□□ -1.5
SSR1P43307 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSR1P43307 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
SSR1P43307 AC107021.2-201ENST00000567714 2095 ntBASIC5.65□□□□□ -1.5
SSR1P43307 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSR1P43307 AC063976.2-201ENST00000425667 3556 ntBASIC5.65□□□□□ -1.5
SSR1P43307 TLK1P1-201ENST00000456760 2440 ntBASIC5.65□□□□□ -1.5
SSR1P43307 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSR1P43307 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSR1P43307 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms