Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 CDC42P3-201ENST00000518493 633 ntBASIC6.04□□□□□ -1.44
CIITAP33076 MTND1P6-201ENST00000523621 946 ntBASIC6.04□□□□□ -1.44
CIITAP33076 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 AC005252.1-201ENST00000604518 1063 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC135803.1-201ENST00000608748 565 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC007786.3-201ENST00000615154 596 ntBASIC6.04□□□□□ -1.44
CIITAP33076 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 AC006453.5-201ENST00000636451 619 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC099654.6-201ENST00000636487 512 ntBASIC6.04□□□□□ -1.44
CIITAP33076 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CIITAP33076 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.03□□□□□ -1.44
CIITAP33076 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 OR9K1P-201ENST00000326513 941 ntBASIC6.03□□□□□ -1.44
CIITAP33076 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CIITAP33076 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 AL512504.1-201ENST00000415494 778 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AL354868.1-201ENST00000417077 482 ntBASIC6.03□□□□□ -1.44
CIITAP33076 MRPS21P2-201ENST00000424704 264 ntBASIC6.03□□□□□ -1.44
CIITAP33076 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.03□□□□□ -1.44
CIITAP33076 RN7SL172P-201ENST00000460535 303 ntBASIC6.03□□□□□ -1.44
CIITAP33076 CBX1P5-201ENST00000475330 559 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AC079841.1-201ENST00000481228 950 ntBASIC6.03□□□□□ -1.44
CIITAP33076 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 RPS4XP14-201ENST00000493072 781 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AC072052.1-201ENST00000496556 306 ntBASIC6.03□□□□□ -1.44
CIITAP33076 IGBP1P4-201ENST00000503202 879 ntBASIC6.03□□□□□ -1.44
CIITAP33076 RPS4XP20-201ENST00000505751 772 ntBASIC6.03□□□□□ -1.44
CIITAP33076 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 MTND5P21-201ENST00000531961 522 ntBASIC6.03□□□□□ -1.44
CIITAP33076 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AC127381.1-201ENST00000555979 939 ntBASIC6.03□□□□□ -1.44
CIITAP33076 LINC00557-201ENST00000563184 1279 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.03□□□□□ -1.44
CIITAP33076 AC106730.2-201ENST00000566641 540 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 AL139022.2-201ENST00000606934 443 ntBASIC6.03□□□□□ -1.44
CIITAP33076 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 AC110792.4-201ENST00000609843 298 ntBASIC6.03□□□□□ -1.44
CIITAP33076 BX323046.1-201ENST00000610145 535 ntBASIC6.03□□□□□ -1.44
CIITAP33076 CYP4F35P-202ENST00000636121 390 ntBASIC6.03□□□□□ -1.44
CIITAP33076 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CIITAP33076 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.03□□□□□ -1.44
CIITAP33076 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CIITAP33076 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
CIITAP33076 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
CIITAP33076 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.02□□□□□ -1.45
CIITAP33076 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CIITAP33076 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.02□□□□□ -1.45
CIITAP33076 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 NPM1P18-201ENST00000434232 732 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.02□□□□□ -1.45
CIITAP33076 AC016772.1-201ENST00000444170 1261 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 DNAJB5P1-201ENST00000454004 806 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 RN7SL799P-201ENST00000475891 298 ntBASIC6.02□□□□□ -1.45
CIITAP33076 RPL7P40-201ENST00000481703 745 ntBASIC6.02□□□□□ -1.45
CIITAP33076 RPS24P16-201ENST00000497294 392 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 HMGN1P9-201ENST00000515212 298 ntBASIC6.02□□□□□ -1.45
CIITAP33076 RN7SKP157-201ENST00000516174 282 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.02□□□□□ -1.45
CIITAP33076 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.02□□□□□ -1.45
CIITAP33076 OR7E18P-201ENST00000592589 702 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AP003117.1-201ENST00000602771 554 ntBASIC6.02□□□□□ -1.45
CIITAP33076 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.02□□□□□ -1.45
CIITAP33076 AC009027.1-201ENST00000604510 479 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AL162431.4-201ENST00000604674 411 ntBASIC6.02□□□□□ -1.45
CIITAP33076 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms