Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR551B-201ENST00000384984 96 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 MIR589-201ENST00000385238 99 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AL034417.1-201ENST00000399343 800 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AL121834.1-202ENST00000404494 277 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RPL21P108-201ENST00000413857 481 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 RPL12P17-201ENST00000432393 498 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AL356121.1-201ENST00000442911 156 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 VDAC2P4-201ENST00000452925 711 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC108161.1-201ENST00000461060 402 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RPS23P6-201ENST00000466136 431 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RBBP4P1-201ENST00000502424 1276 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 Y_RNA.667-201ENST00000516212 107 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 MTND2P17-201ENST00000550281 688 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 SULT1C2P2-201ENST00000562517 294 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 DPPA2P4-201ENST00000563717 878 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AP001437.1-201ENST00000608783 456 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC087565.3-203ENST00000641018 837 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 OR8G3P-202ENST00000641572 1255 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMAP28067 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMAP28067 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC093535.2-201ENST00000624769 2326 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC007382.1-201ENST00000624376 2618 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC139713.2-215ENST00000641428 5037 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 RN7SKP257-201ENST00000364525 309 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMAP28067 RNU1-74P-201ENST00000384108 171 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC104297.1-201ENST00000393779 870 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AL512422.1-201ENST00000407033 553 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 U3.32-201ENST00000408116 212 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 NMNAT1P2-201ENST00000435192 860 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC068228.1-201ENST00000461723 211 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 RN7SL817P-201ENST00000480777 288 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC113430.1-201ENST00000506872 718 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 OR5H7P-201ENST00000514084 930 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 RNU2-45P-201ENST00000516068 187 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 OR4A41P-201ENST00000533053 928 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 GSTP1P1-201ENST00000548078 319 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC015802.2-201ENST00000589690 189 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC091979.2-201ENST00000607514 214 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 SAMMSON-209ENST00000641222 1100 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMAP28067 HSPA8P17-201ENST00000427029 1382 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 MTCO1P22-201ENST00000604619 1360 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC104966.1-201ENST00000467010 1464 ntBASIC4.47□□□□□ -1.69
HLA-DMAP28067 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMAP28067 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HLA-DMAP28067 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMAP28067 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
HLA-DMAP28067 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMAP28067 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMAP28067 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
HLA-DMAP28067 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DMAP28067 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC091046.3-201ENST00000631455 1574 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms