Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LRRC37BP1-201ENST00000398851 714 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AL358178.1-201ENST00000407698 397 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 RPL6P21-201ENST00000418672 846 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC074386.1-201ENST00000476560 767 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 RPS4XP14-201ENST00000493072 781 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 COX6B1P5-201ENST00000509843 249 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 IGLV2-28-201ENST00000520681 304 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 OR7E128P-201ENST00000532736 1024 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 EIF1P5-201ENST00000585002 234 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC093799.2-201ENST00000610062 578 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC008833.1-201ENST00000611633 691 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AP000648.2-201ENST00000624182 404 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC073869.10-201ENST00000642016 354 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC104623.2-202ENST00000623477 4002 ntBASIC5.1□□□□□ -1.59
HLA-DQB2P05538 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC090220.1-201ENST00000593078 1699 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 MIR765-201ENST00000390226 114 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 BMS1P13-201ENST00000417301 885 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 MRPL35P2-201ENST00000448009 511 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 SNORA70.11-201ENST00000515987 138 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 SNORA70.13-201ENST00000516116 138 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 OR10G5P-201ENST00000532733 358 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 OR7E18P-201ENST00000592589 702 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC002069.2-201ENST00000603580 883 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 AC009163.6-201ENST00000612367 342 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 BX005214.3-202ENST00000619809 325 ntBASIC5.09□□□□□ -1.59
HLA-DQB2P05538 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQB2P05538 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQB2P05538 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 RNA5SP428-201ENST00000365129 132 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC013429.2-201ENST00000418798 781 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC104333.2-201ENST00000422630 192 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 OR7E125P-201ENST00000443450 846 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC109462.1-201ENST00000491087 368 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 RN7SKP66-201ENST00000516681 231 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC105031.1-201ENST00000518550 476 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
HLA-DQB2P05538 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms