Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 MIR620-201ENST00000385232 95 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AL355143.1-201ENST00000407101 841 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 NPM1P36-201ENST00000415681 835 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 OR2A3P-201ENST00000493774 953 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 COX6B1P5-201ENST00000509843 249 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 OR11H3P-201ENST00000554547 982 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 MTND1P8-201ENST00000571424 950 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 BNIP3P31-201ENST00000604515 566 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC005252.1-201ENST00000604518 1063 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC034229.4-201ENST00000607861 441 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 OR7M1P-201ENST00000608946 533 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC135068.5-201ENST00000624197 983 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 AC006511.3-201ENST00000624929 1783 ntBASIC7.91□□□□□ -1.14
RAPGEF3O95398 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RAPGEF3O95398 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RAPGEF3O95398 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 RNU6-152P-201ENST00000384037 107 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 RNU1-136P-201ENST00000384181 164 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 AC007559.1-201ENST00000428736 355 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 RPL10P17-201ENST00000453852 316 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 RPL12P39-201ENST00000455456 496 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 RNA5SP43-201ENST00000516559 110 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 SCARNA1-201ENST00000517138 166 ntBASIC7.9□□□□□ -1.14
RAPGEF3O95398 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.9□□□□□ -1.14
RAPGEF3O95398 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RAPGEF3O95398 AC022164.1-201ENST00000568767 2673 ntBASIC7.9□□□□□ -1.15
RAPGEF3O95398 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RAPGEF3O95398 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.9□□□□□ -1.15
RAPGEF3O95398 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
RAPGEF3O95398 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 RNA5SP388-201ENST00000362584 119 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 SNORA27.3-201ENST00000364937 134 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 SNORA72.3-201ENST00000365074 132 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 RN7SKP100-201ENST00000411258 284 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC073464.3-201ENST00000422564 712 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 AL365220.1-201ENST00000432923 399 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC122718.1-201ENST00000439448 744 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 EIF2S2P4-201ENST00000461070 984 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 FAM133DP-201ENST00000464802 691 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms