Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.35□□□□□ -1.71
UPK1BO75841 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 AC245014.3-201ENST00000618589 347 ntBASIC4.35□□□□□ -1.71
UPK1BO75841 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 AC089999.3-201ENST00000622440 577 ntBASIC4.35□□□□□ -1.71
UPK1BO75841 AC015804.1-201ENST00000622935 435 ntBASIC4.35□□□□□ -1.71
UPK1BO75841 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.35□□□□□ -1.71
UPK1BO75841 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
UPK1BO75841 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
UPK1BO75841 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
UPK1BO75841 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1BO75841 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1BO75841 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1BO75841 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1BO75841 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
UPK1BO75841 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 SNORA73.1-201ENST00000363107 205 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1BO75841 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 SNORA2.3-201ENST00000383920 135 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 GAPDHP15-201ENST00000398586 975 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AL035422.1-201ENST00000414193 397 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 VN1R31P-201ENST00000417498 730 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 SRSF1P1-201ENST00000424058 520 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC092162.1-201ENST00000432828 434 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 HMGB3P24-201ENST00000433260 622 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 RPS17P2-201ENST00000461663 408 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 ATP5G1P3-201ENST00000463301 410 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AP003385.3-201ENST00000472498 287 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 RPL23AP65-201ENST00000475608 468 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 RN7SL193P-201ENST00000491708 276 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC108103.1-201ENST00000511286 446 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 HMGB1P42-201ENST00000532126 553 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 RN7SL32P-201ENST00000580514 281 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 AC008638.3-201ENST00000603341 463 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 PPATP2-201ENST00000605635 508 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.34□□□□□ -1.71
UPK1BO75841 MIR6732-201ENST00000619365 60 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
UPK1BO75841 OR8G3P-202ENST00000641572 1255 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1BO75841 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
UPK1BO75841 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.71
UPK1BO75841 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1BO75841 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
UPK1BO75841 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.34□□□□□ -1.72
UPK1BO75841 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
UPK1BO75841 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1BO75841 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 RNU6-1331P-201ENST00000363658 106 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 MIR921-201ENST00000401133 56 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 RN7SKP216-201ENST00000411050 312 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1BO75841 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 RAB9AP5-201ENST00000437794 597 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC004938.1-201ENST00000438468 308 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AL450023.3-201ENST00000440592 271 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 RAB9AP2-201ENST00000443911 597 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1BO75841 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC104634.1-201ENST00000452720 462 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 FGF7P3-201ENST00000454645 303 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms