Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHOX2O60902 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHOX2O60902 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHOX2O60902 AC068446.1-201ENST00000556425 1549 ntBASIC5.15□□□□□ -1.58
SHOX2O60902 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHOX2O60902 RNA5SP477-201ENST00000362639 119 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.15□□□□□ -1.59
SHOX2O60902 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHOX2O60902 SUGT1P2-201ENST00000379452 992 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AC002524.1-201ENST00000411687 547 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AC245060.4-201ENST00000413293 1121 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.15□□□□□ -1.59
SHOX2O60902 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.15□□□□□ -1.59
SHOX2O60902 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.15□□□□□ -1.59
SHOX2O60902 VDAC2P4-201ENST00000452925 711 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.15□□□□□ -1.59
SHOX2O60902 RN7SL423P-201ENST00000486202 304 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 RN7SL101P-201ENST00000496350 279 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.15□□□□□ -1.59
SHOX2O60902 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHOX2O60902 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.15□□□□□ -1.59
SHOX2O60902 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.15□□□□□ -1.59
SHOX2O60902 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.15□□□□□ -1.59
SHOX2O60902 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.15□□□□□ -1.59
SHOX2O60902 AL512310.9-201ENST00000553311 948 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AL845552.1-201ENST00000556820 323 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHOX2O60902 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.15□□□□□ -1.59
SHOX2O60902 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.15□□□□□ -1.59
SHOX2O60902 AC013244.1-201ENST00000604279 193 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AC026979.4-201ENST00000606555 645 ntBASIC5.15□□□□□ -1.59
SHOX2O60902 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.15□□□□□ -1.59
SHOX2O60902 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.15□□□□□ -1.59
SHOX2O60902 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.15□□□□□ -1.59
SHOX2O60902 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHOX2O60902 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHOX2O60902 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHOX2O60902 RNU1-20P-201ENST00000363314 162 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 TRAV35-201ENST00000390462 330 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AL121834.1-202ENST00000404494 277 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.14□□□□□ -1.59
SHOX2O60902 HMGB3P24-201ENST00000433260 622 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AL161722.2-201ENST00000434731 981 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AL391987.1-201ENST00000441025 200 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC090589.1-201ENST00000473109 362 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 RPL23AP37-201ENST00000479658 549 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AC022215.1-201ENST00000481770 362 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 RPS23P1-201ENST00000491662 432 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 RN7SL441P-201ENST00000492388 296 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHOX2O60902 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC068305.2-201ENST00000550567 1205 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHOX2O60902 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.14□□□□□ -1.59
SHOX2O60902 MIR6768-201ENST00000610734 72 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AC004232.3-201ENST00000622977 525 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 AC138627.1-204ENST00000641894 765 ntBASIC5.14□□□□□ -1.59
SHOX2O60902 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHOX2O60902 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHOX2O60902 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
SHOX2O60902 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.14□□□□□ -1.59
SHOX2O60902 AL592182.3-201ENST00000642132 3304 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SHOX2O60902 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 AC091046.3-201ENST00000631455 1574 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 SNORA16A-201ENST00000384342 137 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 OR2X1P-201ENST00000421144 687 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 EIF4EP1-201ENST00000422311 642 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 MYO5BP2-201ENST00000449815 1277 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 SETP20-201ENST00000457046 852 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 AC021733.2-201ENST00000518830 497 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms