Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
SSX4O60224 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 AC011755.1-201ENST00000623763 2049 ntBASIC5.07□□□□□ -1.6
SSX4O60224 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 THAP12P9-201ENST00000503971 2360 ntBASIC5.07□□□□□ -1.6
SSX4O60224 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.07□□□□□ -1.6
SSX4O60224 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 MIR375-201ENST00000362103 64 ntBASIC5.07□□□□□ -1.6
SSX4O60224 RNU1-150P-201ENST00000362491 162 ntBASIC5.07□□□□□ -1.6
SSX4O60224 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSX4O60224 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 GAPDHP15-201ENST00000398586 975 ntBASIC5.07□□□□□ -1.6
SSX4O60224 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 AC211486.3-201ENST00000412694 621 ntBASIC5.07□□□□□ -1.6
SSX4O60224 OR2AT2P-201ENST00000413438 905 ntBASIC5.07□□□□□ -1.6
SSX4O60224 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 RPA2P2-201ENST00000419698 796 ntBASIC5.07□□□□□ -1.6
SSX4O60224 GNG5P5-201ENST00000420444 220 ntBASIC5.07□□□□□ -1.6
SSX4O60224 UBE2V1P6-201ENST00000430840 422 ntBASIC5.07□□□□□ -1.6
SSX4O60224 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 BMS1P10-201ENST00000443754 1120 ntBASIC5.07□□□□□ -1.6
SSX4O60224 CBX1P2-201ENST00000453841 458 ntBASIC5.07□□□□□ -1.6
SSX4O60224 GEMIN2P1-201ENST00000454246 752 ntBASIC5.07□□□□□ -1.6
SSX4O60224 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.07□□□□□ -1.6
SSX4O60224 AC092691.2-201ENST00000461787 803 ntBASIC5.07□□□□□ -1.6
SSX4O60224 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 SNORA76.2-201ENST00000517095 137 ntBASIC5.07□□□□□ -1.6
SSX4O60224 VTA1P2-201ENST00000520205 911 ntBASIC5.07□□□□□ -1.6
SSX4O60224 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 AC004923.2-201ENST00000529649 369 ntBASIC5.07□□□□□ -1.6
SSX4O60224 AC092451.2-201ENST00000538746 658 ntBASIC5.07□□□□□ -1.6
SSX4O60224 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.07□□□□□ -1.6
SSX4O60224 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SSX4O60224 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 MIR1264-201ENST00000616374 69 ntBASIC5.07□□□□□ -1.6
SSX4O60224 AC006249.1-201ENST00000621223 471 ntBASIC5.07□□□□□ -1.6
SSX4O60224 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX4O60224 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX4O60224 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSX4O60224 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX4O60224 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX4O60224 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX4O60224 MFSD8-239ENST00000641590 2479 ntBASIC5.06□□□□□ -1.6
SSX4O60224 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX4O60224 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX4O60224 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX4O60224 RNU4-7P-201ENST00000364758 141 ntBASIC5.06□□□□□ -1.6
SSX4O60224 RNU6-650P-201ENST00000365658 111 ntBASIC5.06□□□□□ -1.6
SSX4O60224 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 EI24P3-201ENST00000399046 1062 ntBASIC5.06□□□□□ -1.6
SSX4O60224 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 RPL35AP3-201ENST00000414680 288 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AL590806.1-201ENST00000415818 853 ntBASIC5.06□□□□□ -1.6
SSX4O60224 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 RPL34P3-201ENST00000421454 338 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 AC113412.1-201ENST00000425840 504 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 LYPLA1P1-201ENST00000434514 622 ntBASIC5.06□□□□□ -1.6
SSX4O60224 HMGB3P10-201ENST00000434734 572 ntBASIC5.06□□□□□ -1.6
SSX4O60224 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX4O60224 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 TCEA1P3-201ENST00000443005 880 ntBASIC5.06□□□□□ -1.6
SSX4O60224 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 AL157827.1-201ENST00000447622 132 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 CALM1P2-201ENST00000452941 448 ntBASIC5.06□□□□□ -1.6
SSX4O60224 MTND2P39-201ENST00000457230 764 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AL603882.1-201ENST00000463059 681 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC023245.1-201ENST00000468501 517 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 AC027308.1-201ENST00000517993 110 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms