Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 Y_RNA.110-201ENST00000363220 99 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNU6-1251P-201ENST00000364502 107 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR7E156P-201ENST00000400303 464 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CTSL3P-202ENST00000412179 788 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CLUHP1-201ENST00000435012 1190 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 GAPDHP58-201ENST00000438477 1006 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CYCSP24-201ENST00000445119 316 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC012512.1-201ENST00000446594 718 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 GAPDHP25-201ENST00000447061 1001 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BUD31P2-201ENST00000449374 300 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BX842559.2-201ENST00000451418 605 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC104634.1-201ENST00000452720 462 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC079168.1-201ENST00000458741 345 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC005165.2-201ENST00000466070 380 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RPL37P23-201ENST00000492641 294 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC138866.2-201ENST00000508650 584 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNA5SP473-201ENST00000516402 125 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC067904.2-201ENST00000517322 1283 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 YWHABP2-201ENST00000540201 713 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL049872.1-201ENST00000556323 322 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL133247.2-201ENST00000603236 482 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC009597.2-201ENST00000604659 592 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL159169.2-201ENST00000610061 1269 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RMST_5.1-201ENST00000618704 126 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC048341.3-201ENST00000619323 491 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL596275.2-207ENST00000641188 675 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC063976.2-201ENST00000425667 3556 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC091305.2-201ENST00000624049 1576 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR13C1P-202ENST00000641378 2919 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL031595.2-201ENST00000624215 19071 ntBASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MIR133B-201ENST00000362210 119 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNA5SP46-201ENST00000362370 120 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 OR6K3-202ENST00000368146 996 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 HSPA8P15-201ENST00000401676 786 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 Z93019.1-201ENST00000416450 973 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RPL34P3-201ENST00000421454 338 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC104333.2-201ENST00000422630 192 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC115283.1-201ENST00000427353 400 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL590762.3-201ENST00000436372 640 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL157884.3-201ENST00000448273 1184 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AP002345.1-201ENST00000456493 928 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RN7SL189P-201ENST00000468631 289 ntBASIC4.81□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms