Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 MIR6727-201ENST00000620702 65 ntBASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 AC127071.2-201ENST00000623293 527 ntBASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
LINC01558Q9Y6Z2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 MAPK10-373ENST00000641983 6772 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC092162.3-201ENST00000624511 1624 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RNU1-43P-201ENST00000365052 165 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RNA5SP22-201ENST00000365393 109 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RN7SKP269-201ENST00000365545 319 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SNORA51.7-201ENST00000384171 134 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 OR4F7P-201ENST00000402444 931 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 Z98941.1-201ENST00000407764 100 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RN7SKP221-201ENST00000410420 301 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RN7SKP177-201ENST00000410567 355 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL357752.1-201ENST00000412817 349 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DHFRP2-201ENST00000414224 547 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RPL21P50-201ENST00000417698 477 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 QRSL1P2-201ENST00000418582 964 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 KIF4CP-201ENST00000422742 1279 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RPL23AP34-201ENST00000423483 410 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL662874.1-201ENST00000426065 230 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC092162.1-201ENST00000432828 434 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 CFL1P1-202ENST00000432948 411 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 PRPF38AP2-201ENST00000438179 851 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC027124.1-201ENST00000440852 466 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 COX4I1P2-201ENST00000447446 547 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC104651.2-201ENST00000447549 528 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC019080.2-201ENST00000453859 394 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 ANP32BP2-201ENST00000454525 545 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RN7SL209P-201ENST00000488309 276 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC093870.1-201ENST00000506837 213 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC114801.1-201ENST00000512633 297 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC006427.1-201ENST00000514359 712 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 IGBP1P1-201ENST00000554337 1009 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AP005403.1-201ENST00000579720 229 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL080312.2-201ENST00000613001 630 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL021918.2-201ENST00000613415 194 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC118658.2-201ENST00000618697 459 ntBASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms