Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RNA5SP305-201ENST00000362665 119 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RNU1-149P-201ENST00000390870 161 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC104297.1-201ENST00000393779 870 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AL589647.1-201ENST00000402485 466 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 DUTP5-201ENST00000406790 469 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AL358178.1-201ENST00000407698 397 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC007161.1-204ENST00000423039 460 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 TMEM183AP1-205ENST00000432739 290 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 VN1R54P-201ENST00000435210 1049 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 PSMD10P3-201ENST00000437000 448 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 MTND4LP12-201ENST00000448237 295 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RPL35AP28-201ENST00000459730 331 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RN7SL188P-201ENST00000469842 285 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AL671862.1-201ENST00000515851 349 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RPL10P14-201ENST00000565265 298 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 MIR4646-201ENST00000580775 63 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 H3F3BP2-201ENST00000583907 357 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC006116.3-201ENST00000592968 361 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC006272.2-201ENST00000594725 163 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC124856.1-201ENST00000600819 896 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC069307.1-201ENST00000602820 447 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC006363.1-201ENST00000603806 463 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 TAS2R6P-201ENST00000605022 826 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AL135786.2-201ENST00000608422 615 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC074101.1-201ENST00000637861 241 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 THAP12P8-201ENST00000447914 2115 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 RNA5SP296-201ENST00000410523 111 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC096921.1-201ENST00000411661 375 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 RAB9AP4-201ENST00000415230 609 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 RNF10P1-201ENST00000418589 369 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 GSTM5P1-201ENST00000434751 660 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AL772161.1-201ENST00000439130 476 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 NANOGP9-201ENST00000439890 892 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC091685.2-201ENST00000454924 864 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 BX284632.1-201ENST00000478218 541 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC015864.1-201ENST00000496512 544 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 RPSAP51-201ENST00000497462 645 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 HMGB1P44-201ENST00000508597 572 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 MTND6P2-201ENST00000512226 524 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 MTND2P13-201ENST00000577438 1039 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AL137072.1-201ENST00000603444 466 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 MIR6748-201ENST00000610433 71 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC138627.1-204ENST00000641894 765 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 AC023421.1-201ENST00000590535 1785 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 HSPA8P14-201ENST00000552265 1805 ntBASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.41□□□□□ -1.54
TM9SF3Q9HD45 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AL603750.1-201ENST00000624216 1717 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms