Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC006530.1-201ENST00000555980 571 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC026956.1-201ENST00000558741 396 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC087481.2-201ENST00000565492 330 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 MIR4732-201ENST00000581873 76 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC107982.3-201ENST00000584957 985 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC091193.1-201ENST00000604640 448 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC096553.1-201ENST00000605169 829 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC008443.7-201ENST00000622195 246 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC010624.4-201ENST00000597606 1351 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC105749.1-201ENST00000631338 2008 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC089998.1-201ENST00000548575 3141 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC068769.1-201ENST00000474767 2426 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 SNORA70H-201ENST00000383910 135 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RNU6-1200P-201ENST00000384162 107 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 SNORA70J-201ENST00000384182 135 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 MIR551B-201ENST00000384984 96 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RPL26P37-201ENST00000411983 438 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 OR8G2P-201ENST00000412796 908 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 TAF13P2-201ENST00000416876 286 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 USP9YP35-201ENST00000435696 412 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 MTND3P1-201ENST00000441336 220 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 GAPDHP37-201ENST00000442317 968 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL356121.1-201ENST00000442911 156 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL512326.1-201ENST00000443050 721 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AL592437.1-201ENST00000443781 492 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 VN1R38P-201ENST00000450265 887 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 TPMTP4-201ENST00000450749 678 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 YRDCP3-201ENST00000456507 480 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RPL23AP64-201ENST00000469465 435 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC092824.1-201ENST00000483524 576 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC114324.2-202ENST00000503812 134 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC109458.1-201ENST00000508858 316 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC079140.3-201ENST00000511111 550 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RN7SKP141-201ENST00000516167 338 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 IGHV1-14-201ENST00000523391 241 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 OR8G3P-201ENST00000533406 921 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC074051.3-201ENST00000570238 358 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC011260.1-201ENST00000578420 472 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 MIR212-201ENST00000586026 110 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 AC087683.1-201ENST00000591187 441 ntBASIC5.76□□□□□ -1.49
SEC61A2Q9H9S3 RPL7AP69-201ENST00000595306 806 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms