Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL008729.2-201ENST00000606393 473 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 BMS1P3-201ENST00000372011 932 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 NPM1P10-201ENST00000398310 865 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 VDAC2P1-201ENST00000399358 958 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 CLUHP1-201ENST00000435012 1190 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AP006222.1-205ENST00000450734 457 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 FCF1P7-201ENST00000451185 558 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 RN7SL515P-201ENST00000463999 297 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC073073.1-201ENST00000493920 463 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 NRBF2P4-201ENST00000520874 850 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 RBM22P12-201ENST00000567098 1255 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 OR8G7P-201ENST00000616658 848 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AL121890.2-201ENST00000617644 465 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AC243960.7-201ENST00000623532 707 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 AL138820.1-201ENST00000617901 5305 ntBASIC5.09□□□□□ -1.59
CCDC28BQ9BUN5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC28BQ9BUN5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CCDC28BQ9BUN5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
CCDC28BQ9BUN5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC28BQ9BUN5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC28BQ9BUN5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 IL6STP1-201ENST00000346911 1020 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 RNU1-74P-201ENST00000384108 171 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 HMGB1P32-201ENST00000425971 565 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 ARL4AP3-201ENST00000441452 574 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC105399.1-202ENST00000447303 205 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC108161.1-201ENST00000461060 402 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC113430.1-201ENST00000506872 718 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 RNU6-362P-201ENST00000516736 90 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC025857.1-201ENST00000525252 377 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 CASP1P2-201ENST00000526830 1258 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 YWHABP2-201ENST00000540201 713 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC008814.1-201ENST00000603797 406 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AL118556.2-201ENST00000614375 824 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC079298.2-201ENST00000623885 459 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC104118.1-201ENST00000607625 1589 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 CASC19-204ENST00000641001 2055 ntBASIC5.08□□□□□ -1.6
CCDC28BQ9BUN5 OR14L1P-202ENST00000641545 3009 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms