Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 PDZK1P1-202ENST00000425209 1350 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC092376.2-201ENST00000622621 4116 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 SPATA2P1-201ENST00000431223 2055 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 RNU4-39P-201ENST00000362455 127 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 U3.7-201ENST00000363668 216 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 RN7SKP78-201ENST00000364711 318 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 RNU6-532P-201ENST00000384318 107 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSX3Q99909 AL031985.1-201ENST00000392713 418 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 RPL11P3-201ENST00000395256 523 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 AL391422.1-201ENST00000402155 436 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 OR1F12-201ENST00000402365 945 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 RPS3AP2-201ENST00000407190 754 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 MYL6P5-201ENST00000412707 459 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC245060.4-201ENST00000413293 1121 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC048351.1-201ENST00000420064 602 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC099677.3-201ENST00000427081 395 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 BX323845.3-201ENST00000428215 527 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AL606490.7-201ENST00000433136 191 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 RPS7P3-201ENST00000443360 580 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 SETP20-201ENST00000457046 852 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 AC099521.1-201ENST00000482557 334 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC021087.2-201ENST00000504656 1203 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 TOMM22P4-201ENST00000511318 336 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 RNU6-347P-201ENST00000516658 105 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 HIGD1AP18-201ENST00000520730 278 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AP000648.1-201ENST00000529682 397 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC090022.1-201ENST00000546569 311 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC084824.2-201ENST00000548906 345 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC127381.1-201ENST00000555979 939 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC006530.1-201ENST00000555980 571 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 AL133247.2-201ENST00000603236 482 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 AL031601.1-201ENST00000605702 394 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX3Q99909 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSX3Q99909 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 OR5AC4P-202ENST00000642086 985 ntBASIC4.78□□□□□ -1.64
SSX3Q99909 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX3Q99909 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX3Q99909 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX3Q99909 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.65
SSX3Q99909 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.77□□□□□ -1.65
SSX3Q99909 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX3Q99909 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX3Q99909 AC022417.1-201ENST00000624768 1303 ntBASIC4.77□□□□□ -1.65
SSX3Q99909 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX3Q99909 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSX3Q99909 AC011155.1-201ENST00000316512 456 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 322.4 ms