Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC007938.2-201ENST00000604666 2634 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 SNORA72.3-201ENST00000365074 132 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 RNU4-2-201ENST00000365668 141 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PKP4Q99569 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 GLUD1P9-201ENST00000420997 1173 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 BX276092.6-201ENST00000430476 250 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.36□□□□□ -1.55
PKP4Q99569 RPS15AP29-201ENST00000445539 400 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 BX276092.8-201ENST00000455722 250 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC015908.1-201ENST00000478739 476 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC119751.4-201ENST00000507498 357 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 MTATP6P9-201ENST00000515039 680 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 OR4A17P-201ENST00000526032 904 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC022404.1-201ENST00000555320 273 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 LINC00557-201ENST00000563184 1279 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AP005403.1-201ENST00000579720 229 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.36□□□□□ -1.55
PKP4Q99569 MIR1273E-201ENST00000581165 102 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.36□□□□□ -1.55
PKP4Q99569 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC009237.13-201ENST00000603193 276 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 BNIP3P19-201ENST00000605397 577 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC026979.4-201ENST00000606555 645 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 OR51C1P-201ENST00000608504 942 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AL118522.2-201ENST00000616045 615 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AC132068.1-201ENST00000623805 459 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.36□□□□□ -1.55
PKP4Q99569 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.36□□□□□ -1.55
PKP4Q99569 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
PKP4Q99569 AL136520.1-201ENST00000600311 1322 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 AL592494.2-201ENST00000425455 1548 ntBASIC5.36□□□□□ -1.55
PKP4Q99569 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.36□□□□□ -1.55
PKP4Q99569 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PKP4Q99569 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKP4Q99569 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.36□□□□□ -1.55
PKP4Q99569 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PKP4Q99569 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.35□□□□□ -1.55
PKP4Q99569 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PKP4Q99569 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKP4Q99569 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PKP4Q99569 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PKP4Q99569 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC079097.1-201ENST00000512187 1399 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC092681.1-201ENST00000297369 291 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PKP4Q99569 SNORD65-201ENST00000391079 73 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 SNORA17A-201ENST00000391185 133 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 MTND4P11-201ENST00000417020 1058 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 NPM1P26-201ENST00000426339 738 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 NDUFB4P8-201ENST00000435351 367 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AL390119.1-201ENST00000440329 312 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AL358876.1-201ENST00000453364 1075 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 PSAT1P4-201ENST00000466500 526 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 RN7SL197P-201ENST00000466981 299 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 LARP7P4-201ENST00000481075 878 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 MTND3P24-201ENST00000506306 329 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC097486.1-201ENST00000515331 210 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC109635.6-201ENST00000525487 1113 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.35□□□□□ -1.55
PKP4Q99569 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC009712.1-201ENST00000564938 316 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.35□□□□□ -1.55
PKP4Q99569 AC104695.2-201ENST00000605056 775 ntBASIC5.35□□□□□ -1.55
PKP4Q99569 AL139124.1-201ENST00000609123 421 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms