Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 RPL23AP60-201ENST00000450011 454 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL122020.1-201ENST00000472287 459 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 CBX1P5-201ENST00000475330 559 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC010374.1-201ENST00000503762 1237 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL158068.1-201ENST00000506116 616 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 TOMM22P4-201ENST00000511318 336 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 snoU109.5-201ENST00000516231 132 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC087894.1-201ENST00000538359 518 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC244502.2-201ENST00000543361 851 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 DUX4L52-201ENST00000549363 777 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL606834.3-201ENST00000602615 496 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL136131.3-201ENST00000607600 188 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 MIR6793-201ENST00000612376 63 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL137067.2-201ENST00000621202 131 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC026523.2-201ENST00000625039 7739 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 RBPJP7-201ENST00000442803 1447 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 RBPJP5-201ENST00000449433 1447 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AC008627.1-201ENST00000517511 1704 ntBASIC5.71□□□□□ -1.49
VPS50Q96JG6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VPS50Q96JG6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
VPS50Q96JG6 ZNF90P1-201ENST00000480493 1951 ntBASIC5.71□□□□□ -1.49
VPS50Q96JG6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL672167.2-201ENST00000377164 879 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 RNU6-729P-201ENST00000384399 107 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 RPS3P2-201ENST00000421346 701 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC066692.1-201ENST00000421721 457 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL035660.1-201ENST00000422041 222 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC241520.1-201ENST00000422654 1099 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 MED6P1-201ENST00000439659 713 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL353898.1-201ENST00000444055 238 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC111000.6-201ENST00000514471 709 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 RNA5SP230-201ENST00000517039 122 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC104229.1-201ENST00000561364 255 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 MIR4509-3-201ENST00000578671 94 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AP000919.1-202ENST00000581139 1264 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 MIR4509-2-201ENST00000583920 94 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC068768.2-201ENST00000602352 343 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL591167.1-201ENST00000607321 456 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC087683.2-201ENST00000611384 326 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 BNIP3P41-202ENST00000616656 861 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 MIR4509-1-201ENST00000618224 94 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AL158062.1-201ENST00000619632 745 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC096708.4-201ENST00000620563 552 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC129915.3-201ENST00000634128 948 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 MIR4302-201ENST00000638058 60 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms